Gene Francci3_2947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2947 
Symbol 
ID3903762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3481681 
End bp3482061 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content68% 
IMG OID637880268 
ProductNAD/NADP transhydrogenase alpha subunit-like 
Protein accessionYP_482034 
Protein GI86741634 
COG category[C] Energy production and conversion 
COG ID[COG3288] NAD/NADP transhydrogenase alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.627633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.348599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA CGTTGGTCAC CGACCTGACC GTCCTCGTCC TGAGCCTGCT GGTCGGGTTC 
GAGGTCATCA GCAAGGTGCC GTCCACCTTG CATACACCGT TGATGTCCGG CGCGAACGCG
ATCCACGGCA TCGTCGTCGT CGGCGCGATG CTGGTCGCCG CGACAGCGCA CACCCCACTG
GGCTACGTCC TGGTGTTCTT CGCCGCCGCG TTCGCCGCGA TGAACGTGGT GGGCGGCTAC
GTGGTGACGG ACCGGATGCT GGAGATGTTC CACCGGCGCC CGGCCGCGGA GCGAAGCCGG
CTCGCAGGGC AGAACCAGCC GGCAGGGCGG AACCAGCCGG CAGGGCAGAA CCAGCCGGCA
GTGGGGAGTG AGCGGTCATG A
 
Protein sequence
MTETLVTDLT VLVLSLLVGF EVISKVPSTL HTPLMSGANA IHGIVVVGAM LVAATAHTPL 
GYVLVFFAAA FAAMNVVGGY VVTDRMLEMF HRRPAAERSR LAGQNQPAGR NQPAGQNQPA
VGSERS