| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2914 |
|---|
| Symbol | |
|---|
| ID | 3903978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 3433833 |
|---|
| End bp | 3434306 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637880235 |
|---|
| Product | 3-demethylubiquinone-9 3-methyltransferase |
|---|
| Protein accession | YP_482001 |
|---|
| Protein GI | 86741601 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3865] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.269995 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.303399 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCAA TCACGCCATG TCTGTGGTTC GACACTCAGG GCGAGGAGGC GGCCAGGTTC
TACACGTCGA TCTTCCCGAA CTCGCGGATC GTCGACATCA CCCGCTACGG CCCGGCCGGG
CCCCGTCCCG AGGGCACGGT CATGACCGTC CGGTTTGAAC TGGATGGCCA GGAGTACGTC
GCGCTGAACG GCGGACCCGA GTTCACCTTC TCGGAGGGGA TCTCGCTGCA GGTCGGCTGC
GGTTCCCAGG CCGAGATCGA CGAGTACTGG GACCGGCTGA CCGACGGTGG CGAGGCAGGA
CCGTGTGGGT GGCTCAAGGA CCGGTACGGG CTGTCCTGGC AGATCGTGCC CACGGCCCTG
TCTGAGCTCC TTGACGATCC CGACCCGGGC CGGTCCCAGC GGGCGATGCA GGCGATGCTG
AAGATGTCGA AGCTCGACAT CGAGGAGTTG CGCCGGGCCG CCGACGAGGC GTGA
|
|---|
| Protein sequence | MPAITPCLWF DTQGEEAARF YTSIFPNSRI VDITRYGPAG PRPEGTVMTV RFELDGQEYV
ALNGGPEFTF SEGISLQVGC GSQAEIDEYW DRLTDGGEAG PCGWLKDRYG LSWQIVPTAL
SELLDDPDPG RSQRAMQAML KMSKLDIEEL RRAADEA
|
|---|
| |