Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2903 |
Symbol | |
ID | 3903967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3418410 |
End bp | 3419087 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637880224 |
Product | hypothetical protein |
Protein accession | YP_481990 |
Protein GI | 86741590 |
COG category | [S] Function unknown |
COG ID | [COG2013] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.1717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.712803 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCAGGGCA GCCTGATCCA GCACTACGGA CCAACTCCGA TCATGGAACG GATGAGCAGG CACGGCTCGA AGATCGCCAA GGTGGTCATG AACCCGGGCC AGGATCTCTT CGCCCGGGTC GGGTCAATGA TCGCCTACGA GGGGTTGATC GACTTCAATC CGCAGCCGCC GCAGCTCGGC CGGATCGCCT CCTCCTGGGC GACGGGTGAG GGCGTTCCGC TCATGACGGC GACCGGCCAG GGGCTGCTGT ACCTCGCGGA CTACGGCAAG GAGGTCATCG TCGCGCAGCT TGCCGGCGAG GGACTCTCGG TCAACGGCAA GAACATCCTG GCCTTCGACG CCGGGCTGCA GTGGAGCATC GAGCGGGTCC GCGGCATCAC CATGCTGTCC GGAATGGGGA TGTTCAACGT GGTGGTGCGT GGGCACGGCT GGGTGGCGCT GACCGCCAAG GGCAGTCCGA TCGTGCTCGA CACCCGGGAG GCGTCGACCT ACGTCGACAC CGACGCCCTC GTCGCCTACA CCGATGGGCT GCGCGTCGAG CCCCGGCGCA CCGCCCGGCT CGGCGGGCTC ATCGGGCGCG GCTCCGGGGA GGCGTTCCAG CTCGGCTTTT CCGGCCAGGG GTTCGTCGTC GTGCAACCGA GCGAGGACGA GCGGCCGACC TTCTCGGTGC GGGGCTGA
|
Protein sequence | MQGSLIQHYG PTPIMERMSR HGSKIAKVVM NPGQDLFARV GSMIAYEGLI DFNPQPPQLG RIASSWATGE GVPLMTATGQ GLLYLADYGK EVIVAQLAGE GLSVNGKNIL AFDAGLQWSI ERVRGITMLS GMGMFNVVVR GHGWVALTAK GSPIVLDTRE ASTYVDTDAL VAYTDGLRVE PRRTARLGGL IGRGSGEAFQ LGFSGQGFVV VQPSEDERPT FSVRG
|
| |