Gene Francci3_2903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2903 
Symbol 
ID3903967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3418410 
End bp3419087 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content68% 
IMG OID637880224 
Producthypothetical protein 
Protein accessionYP_481990 
Protein GI86741590 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.1717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.712803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGGCA GCCTGATCCA GCACTACGGA CCAACTCCGA TCATGGAACG GATGAGCAGG 
CACGGCTCGA AGATCGCCAA GGTGGTCATG AACCCGGGCC AGGATCTCTT CGCCCGGGTC
GGGTCAATGA TCGCCTACGA GGGGTTGATC GACTTCAATC CGCAGCCGCC GCAGCTCGGC
CGGATCGCCT CCTCCTGGGC GACGGGTGAG GGCGTTCCGC TCATGACGGC GACCGGCCAG
GGGCTGCTGT ACCTCGCGGA CTACGGCAAG GAGGTCATCG TCGCGCAGCT TGCCGGCGAG
GGACTCTCGG TCAACGGCAA GAACATCCTG GCCTTCGACG CCGGGCTGCA GTGGAGCATC
GAGCGGGTCC GCGGCATCAC CATGCTGTCC GGAATGGGGA TGTTCAACGT GGTGGTGCGT
GGGCACGGCT GGGTGGCGCT GACCGCCAAG GGCAGTCCGA TCGTGCTCGA CACCCGGGAG
GCGTCGACCT ACGTCGACAC CGACGCCCTC GTCGCCTACA CCGATGGGCT GCGCGTCGAG
CCCCGGCGCA CCGCCCGGCT CGGCGGGCTC ATCGGGCGCG GCTCCGGGGA GGCGTTCCAG
CTCGGCTTTT CCGGCCAGGG GTTCGTCGTC GTGCAACCGA GCGAGGACGA GCGGCCGACC
TTCTCGGTGC GGGGCTGA
 
Protein sequence
MQGSLIQHYG PTPIMERMSR HGSKIAKVVM NPGQDLFARV GSMIAYEGLI DFNPQPPQLG 
RIASSWATGE GVPLMTATGQ GLLYLADYGK EVIVAQLAGE GLSVNGKNIL AFDAGLQWSI
ERVRGITMLS GMGMFNVVVR GHGWVALTAK GSPIVLDTRE ASTYVDTDAL VAYTDGLRVE
PRRTARLGGL IGRGSGEAFQ LGFSGQGFVV VQPSEDERPT FSVRG