| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2872 |
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| Symbol | |
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| ID | 3906003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3385760 |
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| End bp | 3387445 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637880193 |
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| Product | delta-1-piperideine-6-carboxylate dehydrogenase |
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| Protein accession | YP_481959 |
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| Protein GI | 86741559 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.102568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.763851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGG TACGGCCACG GCGGGTTGGT GCGCTCATTG GCGGACGTCC GCGGGACGGA
CGTCCGCGGG ACGGGTGCGC GCCGCCCGGC GCGGCCGAAG CGGAGCTCAC CCCGGTCCGG
ACGGTGCCCT CGACCAACCC GGCCCGGCTC GACGACGTGG TCGCCGAGGT CGAGCTGGCC
GGCCCGGAGA CGATCCTTGC CGCCGCGGTG GCGGCCCGTG ACGCCCAGCG CACCTGGGCA
GACGTGCCGG CCCCGGTCCG GGGAAGCGTG ATCGGCAATC TCGGCCGGCT CGTCGCGGAC
AACGCCGCCG CGCTCGCCCG GCTCGTCACC CGGGAGATCG GCAAACCGGC GGCCGAGGCT
CGCGGCGAGG TCCAGGAGAT CATCGACACC TGCGAGTTCT TCCGCGGCGA GGGACGCCGG
CTTTACGGCG AGACCGTTCC CTCCGAGATG CCGGACAAGC AGCTGTTCAC CTTCCGGGAG
CCGGTCGGGG TGATGATGGT GATAACAGCG GGGAACTTCC CGGTGGCGGT GCCGTCCTGG
TACATCGTGC CGGCCCTGCT CGCCGGCGAC ACCGTGGTCT GGAAGCCTGC CGAGTACGCG
GCGGCCTGCG CGCAGGCCCT GGTCGAGCTG ATGGCCGCCG CCGGGGTTCC CGCCGGCGCG
GTGAACCTCG TGCCCGCCGA CGGCGCGGCG ACGTCGCTCG GGCTGGAGCG GGCGCTGGCG
GCCGGCGTCG TCGACAAGGT CGGCTTCACC GGATCCACCG AGGTCGGCCG GTTCATCGGC
GCCCTGTGCG GCCGGTACCT GCAGTCGCCG TGCCTGGAAC TCGGCGGGAA GAACCCGATG
GTCGTTGCGC CCGACGCCGA TCTCGACGCC GCCGTCGAAG CGGCGGTGTT CGCCGGGTTC
GGCACCGCCG GGCAGCGGTG CACCTCGCTG GGTACGGCGA TCGTGCACGA GTCGGTGCAC
GCCGAGTTCG TGCGTCGGCT CGACGCCGCC GTGTCCGCGG CGGTCGTCGG CGATCCGACC
CGGGACGTGC TGTACGGGCC GCTGCTCGAC GCCCGGTTCG CGGCCGGGTT CGCCGACCAT
CTCGACCTGA TCCGGGACCA TCACCGGATC TTCGGGTCCA CCGCGGTGGG ACGGATCACG
TCGGCCGGTT TCGGGACGTC GGCCGGTTCA TCGACGCCGT TGACACCGGC AGGGCCGGGA
AGGTGGCCGG GCGGACCGCG TCGCGGCTTC GTCGGCGATC CCGACTCCGG GCTGTACTAC
CACCCGGTGG TGCTCGACGG CGTGCGCCCG GACGACGAGG TGTTCCGCGA GGAGACGTTC
GGTCCGATCA TCGGCGTTAC CACCTACCGC AGCCTCGACG AGGCCATCGA CCTGGCGAAC
CTGCCCGGCT ACGGGCTGTC GTCGTCGATC TACACCGGCG ATGCGGCGAG CGCGTTCCGG
TTCCGGCGGG GGGTGCGGGC CGGGATGGTC AGCGTCAACT CCTCGACGTC GGGCGCGGAG
GCCCACCTGC CCTTCGGTGG CAACGGGCGG TCCGGTAACG GAAGCCGCCA GTCCGGTCGC
TGGGTCCTCG ACCAGGTCAC CCGATGGCAG TCGATGAACT GGGACTACTC CGGCAGGTTG
CAGAAGGCCC AACTCGACAC GGCCGTGCCC CCGGCCGACC TGTCCTTCCG CCTGTCGGAC
CCGTGA
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| Protein sequence | MTLVRPRRVG ALIGGRPRDG RPRDGCAPPG AAEAELTPVR TVPSTNPARL DDVVAEVELA
GPETILAAAV AARDAQRTWA DVPAPVRGSV IGNLGRLVAD NAAALARLVT REIGKPAAEA
RGEVQEIIDT CEFFRGEGRR LYGETVPSEM PDKQLFTFRE PVGVMMVITA GNFPVAVPSW
YIVPALLAGD TVVWKPAEYA AACAQALVEL MAAAGVPAGA VNLVPADGAA TSLGLERALA
AGVVDKVGFT GSTEVGRFIG ALCGRYLQSP CLELGGKNPM VVAPDADLDA AVEAAVFAGF
GTAGQRCTSL GTAIVHESVH AEFVRRLDAA VSAAVVGDPT RDVLYGPLLD ARFAAGFADH
LDLIRDHHRI FGSTAVGRIT SAGFGTSAGS STPLTPAGPG RWPGGPRRGF VGDPDSGLYY
HPVVLDGVRP DDEVFREETF GPIIGVTTYR SLDEAIDLAN LPGYGLSSSI YTGDAASAFR
FRRGVRAGMV SVNSSTSGAE AHLPFGGNGR SGNGSRQSGR WVLDQVTRWQ SMNWDYSGRL
QKAQLDTAVP PADLSFRLSD P
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