| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2841 |
|---|
| Symbol | |
|---|
| ID | 3904753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 3347359 |
|---|
| End bp | 3348711 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637880162 |
|---|
| Product | zeta toxin |
|---|
| Protein accession | YP_481928 |
|---|
| Protein GI | 86741528 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4185] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.21799 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCAGGCG CTTCTGAATA CGATACCGTT GGCCCGGTCA CGAGAATGGC TCTCTTCTGC
CCCGGGAGCG TCCATGGCTG TTCGCCGGTC TCCGGCCAGG TTACCGCGGT GACTCCGGCC
GAGTTCCGTG GCCTCGAAAC CGCCCCGGAA CGACCCGACG CAGGCGGTGG GCCGGTCCCG
GAGCAGTCTC GGGTCACCGA GATCGACAGA AAGCTCGACC TGCTGGACCG CGCCGCCTCC
CCGGGCGACT CACCCGAGCC CCGCCATCAG GAGCGACCGG CCGGCCGGGA TGCTCCCAGC
CGGAACACCT CCAGCATCGA CGCCAAGCTG GACCTTCTCG ACAGGGCGGC GCTCGCCCGT
TCCGGCGGCG GCGCGGCTAC GCCGGCGGAC ACCACCGGCG ACCGGCCGTC CGAGGTCCGC
CCGCCCACCG AGCCCGGGAA CAGCGACCGG GCTCGGACCG AGGCCAAGCT GGCGCTGTTG
GAGGACGCGG CCCGCCGCTA CCGCCCCGAG CCCCCGGACG CGCCCGCCCC CGGTCGGGAG
CGCTGGGCCG TCCGCGAGGC ACCGCGGACT CTGCCGGACG ACCATCCGCT CCTCACCCCG
ACGGACACCA TCAACACCCC CGAACGCGCC GCCCTCCGGG AGAATCTGGT GAAGGAGGTG
ATCGGCGATG CCAAGCCGCC GGAGCAGGGC AGCCCCACCC TCGACCTCAT GGGCGGCGGC
GGAGCCTCCG GCAAGGGCTT CGTGCTGGAG TACCTCAAGG ACGAAGGCCA AGTACCCACC
GAGAACGTAG TCCATCTTGA TCCCGACGAG ATCAAGAAAA TGATCCCCGA GTTCGACGAG
ATCATGGGTG CAGGAGACTC GCGCGCGGCT GAGGTGGTCC ATGAAGAGAG CAGCTCACTC
GCGAAGGGAG TCCTTCAACA GGCCATGGAC CGCCGCCTCA ATATCATCTA CGATAGCACC
CTCGGCAACC CGGAGAAGAC CGCCAAGCTG ATCGATGACG CGCATGCGAA GGGATACGAG
GTTCGCCTAT TCGGGGTGAG TGCCGATCCG GAGCTCGCGG TCACGCGCGC CGCGGACCGC
GCCGCAAAGT CCGGCCGCTA TGTTCCCGTT GACCACCAGC TTGCGGCACA CCGTGGATTC
TCCCAGGGCT TCGAAGGTTA TGCCGAGAAG GCCGATAAAG TACGTCTTTA TGACACCAAC
TCTGAACCCC GACAGATCGC CCGCAAGAGG GCGGGCGAAA TTTTGACAAT TCTCGACCAA
GGATCGTACG ATAAATTTCA AAATAAAATA AACATTAATC CAGAAGCCAT GGGGCCGACA
TCACTGTACA CCGATCGAGG CGAAAACCAA TAA
|
|---|
| Protein sequence | MPGASEYDTV GPVTRMALFC PGSVHGCSPV SGQVTAVTPA EFRGLETAPE RPDAGGGPVP
EQSRVTEIDR KLDLLDRAAS PGDSPEPRHQ ERPAGRDAPS RNTSSIDAKL DLLDRAALAR
SGGGAATPAD TTGDRPSEVR PPTEPGNSDR ARTEAKLALL EDAARRYRPE PPDAPAPGRE
RWAVREAPRT LPDDHPLLTP TDTINTPERA ALRENLVKEV IGDAKPPEQG SPTLDLMGGG
GASGKGFVLE YLKDEGQVPT ENVVHLDPDE IKKMIPEFDE IMGAGDSRAA EVVHEESSSL
AKGVLQQAMD RRLNIIYDST LGNPEKTAKL IDDAHAKGYE VRLFGVSADP ELAVTRAADR
AAKSGRYVPV DHQLAAHRGF SQGFEGYAEK ADKVRLYDTN SEPRQIARKR AGEILTILDQ
GSYDKFQNKI NINPEAMGPT SLYTDRGENQ
|
|---|
| |