Gene Francci3_2731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2731 
Symbol 
ID3904721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3221030 
End bp3221947 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content68% 
IMG OID637880054 
Productalcohol dehydrogenase GroES-like protein 
Protein accessionYP_481820 
Protein GI86741420 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGA TCGTCGTGAC GGACCAGGCT GCGGGAACGG CCGGGATGAG CCTGGTGGAG 
CGGCCCGAGC CGTCGGCGGC GATCAACGAC GTCGTCGTTG AGGTTCATGC GTCGGGTTTC
GTCCCGACTG AGATGGCGTG GCCCTCGACC TGGACCGATC GTCTCGACCG TGACCGAACA
CCGTCGATCC CCGGGCATGA GCTGGCCGGA GTGGTCACGG TCCTCGGCTA TGGCACGACG
GGGCTGTCGG TGGGACAGCG GGTGTTCGGC CTCTCGGACT GGCATCGCGA CGGCACCCTG
GCGCAGTATG TGGCCGTCGA GGCACGCAAT CTCGCACCGC TCCCGGGCGA CGTCGACTTC
ACGGTGGGCG CGAGCCTGCC GATTTCGGGG CTGACCGCGT GGCAGGGGCT GTTCGAGCAC
GGCCGCCTTC AGGCGGGGCA GAGCGTGCTC GTGCATGGCG CGGCCGGCGC AGTCGGGACG
ATGGTGACGC AGCTCGCGCG CGAGTTCGGT GCGTACGTCA TCGGCACCGG ACGCGCTGCC
GACCGGCAGA AGGCGCTCGA CTTCGGCGCG CAGGAGTTCG TCGACCTTGA GAACGACGCG
CTGGAGGACG TAGGCGGGGT CGATCTGGTC TTCGATGTCA TCGGCGGCGA CATCCAGAAG
TGGTCCGCGG GTCTGGTTCG AGCCGGGGGA ACGCTGGTGT CCGTCGTCGG ACCGGTCGGG
GCGCGGCCCG CCGACGGCCT GGCAGTCGAC TTCGTTGTCG AGTCCGATCG CGTTCAACTG
GGTGAGATCG TACAGCGGGT GCGCGACGGA CGGCTGCGAA CGAACATCGG CAACGTCGCG
ACCATCGACA ATGCCGTCGC CGCCCTCAAT CCGACCGAGC GACGTAAGGG AAAGACGATC
ATCAACCTTC GTCCGTGA
 
Protein sequence
MKAIVVTDQA AGTAGMSLVE RPEPSAAIND VVVEVHASGF VPTEMAWPST WTDRLDRDRT 
PSIPGHELAG VVTVLGYGTT GLSVGQRVFG LSDWHRDGTL AQYVAVEARN LAPLPGDVDF
TVGASLPISG LTAWQGLFEH GRLQAGQSVL VHGAAGAVGT MVTQLAREFG AYVIGTGRAA
DRQKALDFGA QEFVDLENDA LEDVGGVDLV FDVIGGDIQK WSAGLVRAGG TLVSVVGPVG
ARPADGLAVD FVVESDRVQL GEIVQRVRDG RLRTNIGNVA TIDNAVAALN PTERRKGKTI
INLRP