| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2602 |
|---|
| Symbol | |
|---|
| ID | 3906508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3070678 |
|---|
| End bp | 3071703 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637879927 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_481693 |
|---|
| Protein GI | 86741293 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4152] ABC-type uncharacterized transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.43511 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.142388 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCA CCGCGAATAG CATCTGGGTG GCAGAGGCAG GGGTTGACCG TTACCTGGAA
CGCCGTGGAA AGCTGGTGCA GGTGGGCGAT GGACGGCTCG AAATCGACGG GGTGTCGAAA
CGGTACGGCG ACGTCGTCGC GTTGGAGTCG ATGACGTTCG AGGTGCGGGC CGGCGAGCTG
TTCGGGTTCG TCGGCAGCAA CGGTGCCGGG AAGACGACGA CGATGCGTAT CGCCCTCGGG
GTGCTCGCGG CGGATTCCGG GGTCGTGCGT TATGACGGCG TTCCGCTGAC GTTACGCACC
CGCCGCCGGA TCGGCTACAT GCCGGAGGAA CGCGGTCTGT ATCCGCGGAT GCGGGTGGGT
GAGCAGCTCG TCTACCTCGC GCAACTGCAC GGAATGGGGC TGCCGGCAGC CCGTCGGGCA
GTGGCGCGGT GGACCGAGCG GCTGGGGGTG TCCAGCCGCT TGGACGACGA GGTGCAGAAG
CTCAGCCTCG GGAACCAGCA GCGGGTGCAG CTGGCCGCCG CGCTCGTGCA CGATCCGGTC
GTCCTGATAC TCGACGAGTC GTTCTCCGGA TTGGACCCGG TGGCCGTCGA CGTGATGAGC
GAGGTGCTGC GGGAGCGTCG CGCCGCCGGG GTTCCGGTGA TGTTCTCCAG CCATCAGCTC
GATCTCGTCG AGCGGTTGTG CGACCGGGTC GGGATCGTGC GGGCGGGCCG GATGGTCGCC
TGCGGTTCGG TTGACGAGTT GCGCGCGGGT GGTGATCTGC AGGTGGTGGT GGACGCGCCG
GCGGCGCCGC CGGGCTGGGC CGACGGGATA CCGGGGGTCG TCGTGCGTCA CCGGGACGGG
CCGCGGACGG TGCTGGGCCT CACCGCGGGC GCCGACGACC AGGCGGTACT GCGCGCGGCG
CTGGCCACGG GCCCGGTGCG GGAGTTCCGT CGTCGCCGGC CGTCGTTGAC CGAGCTGTTC
CGTAACGTCG TCGTGCAGGC CGGGCAGCAG CCGGGGAGTG GGGCGTTCCC GGAGAACGCG
GCGTGA
|
|---|
| Protein sequence | MKTTANSIWV AEAGVDRYLE RRGKLVQVGD GRLEIDGVSK RYGDVVALES MTFEVRAGEL
FGFVGSNGAG KTTTMRIALG VLAADSGVVR YDGVPLTLRT RRRIGYMPEE RGLYPRMRVG
EQLVYLAQLH GMGLPAARRA VARWTERLGV SSRLDDEVQK LSLGNQQRVQ LAAALVHDPV
VLILDESFSG LDPVAVDVMS EVLRERRAAG VPVMFSSHQL DLVERLCDRV GIVRAGRMVA
CGSVDELRAG GDLQVVVDAP AAPPGWADGI PGVVVRHRDG PRTVLGLTAG ADDQAVLRAA
LATGPVREFR RRRPSLTELF RNVVVQAGQQ PGSGAFPENA A
|
|---|
| |