| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2565 |
|---|
| Symbol | |
|---|
| ID | 3904057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3025106 |
|---|
| End bp | 3025468 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637879890 |
|---|
| Product | AbrB family transcriptional regulator |
|---|
| Protein accession | YP_481656 |
|---|
| Protein GI | 86741256 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTTCG CGGGGTGCGG CGGAGGAGGC CCACGGGCCG GGACGACGTC GACCGCACGG
TTGCCCGACC AGCGGACCGG CGGCTTGCGA GGCATGGTGA TGGGATCGAA CTGGTATCGC
CTTCCCATGG AAGCTGTCGT CGATCAAGCA GGTCGGATCG TGCTGCCCAA GTTCATCCGC
GACGCGCTGG GCCTGCTCCC GGGTACGAAG GTGGACATCT CGCCGTACGG CGCTGGTGTG
CAGGTCGTGC CAGCCGGCAG GACCGCGCGC CTCGTGGAGG AGAACGGCGT GCTCGTGGCG
GCCGGCGACA CGGTTGTTGA TGACGAGATC CTGTTCGGCC TCATCGACGC GGGTCGCAGA
TGA
|
|---|
| Protein sequence | MVFAGCGGGG PRAGTTSTAR LPDQRTGGLR GMVMGSNWYR LPMEAVVDQA GRIVLPKFIR
DALGLLPGTK VDISPYGAGV QVVPAGRTAR LVEENGVLVA AGDTVVDDEI LFGLIDAGRR
|
|---|
| |