| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2494 |
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| Symbol | |
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| ID | 3904872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2941957 |
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| End bp | 2943768 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637879824 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_481590 |
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| Protein GI | 86741190 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCGG AGCGGAGCGA GCGGGACGAT AATCCGGGGC TGGTGCCGAC GCTGCGTGAG
TTCGCCCTGC TCGCGGACGG GGAACGGGGT GCGCTGATCG GCCCGGACGG CCGCGTGTGT
TGGATGTGCG TGCCCTCGTG GGCGGACGAC GCGGTGTTCT CGACGCTGAT CGGTGGCGCC
GGCTCCTACT CGGTGACTCC GGCGACCGCC TTCACCTGGG GCGGTTACTA CGAGGACCGG
TCGTTGATCT GGCACAGCCG GTGGGTGACG CGGGCGGGCG TGGCGGAGTG CCGGGAGGCT
CTCGCCCTCC CCGGGCGGCG GCACCGTGCG GTGCTGCTGC GCCGGATTCT CGGGGTCGAG
GGGACCGTGC CGGTGCGGGT GACGCTGGAT CCGCGTCCCG GGTTCGGCCG GCGGGCGGTG
GCGGGGCTGC GGCAAGACGG GCTGGACGGG CCGGACGGGG TGGAGGCCTG GTGCGGGCGA
GTCGGCGAGC TGGAGCTGCG CTGGTCGGGA CGGCTCGCGG CGGTCGCCCG GATCGACCAT
GATGCGGGCG GTGGCAGTCT CGTCGCGGAG CGCCTGGTGC GGGCCGGCGA CTGTCTCGAT
CTTGTGCTGG AGCTCGGTGA GCTGCCGGCG GACCGTCCGG TCCCGGACGT GCTGTGGGCC
GAGACGAAGC GGGCCTGGCG GTCCGCGGTA CCGGAGCTGT CGAGCCTGGC CGGTGTCCGC
GACGCTCAGC ACGCGGTCGC GGTGCTGCGC GGGCTGACCG GCGGCGGGCA CGGGATGGTG
GCCGCGGCCA GCACCTCCCT GCCCGAGCGG GCCCGTCAGG GCCGCGACTA CGACTATCGG
TATGTCTGGA TCCGAGATCA GTGCTACGCG GGGCTGGCGG CCGCGCGGGC CGGCCTCGAC
GGGCTGCTCG ACGACGCCGT CACGTTCGTC ACCGAACGGC TGTTGGCGGA CGGCCCGAAC
CTGCGTCCGG CCTACACCGC CCGCGGTGGC CCGATCCCGG ACGAGCGCCG ACTCGATCTG
CCGGGGTACC CCGGCGGCGA CGACGTGGTC GGGAACAAGG TCGGCCACCA GTTCCAGCTG
GACGTCTTCG GGGAGGCGGC GCTGCTGCTG GCGGCCGCGG CGCGGCGGGG CCGGCTGACC
GATGACGCCC GGCGGGCCGC GGCGGTGACC GCCGGGGTGA TCGCGGCACG CTGGCGGATC
CCGGACACAG GGGTCTGGGA GCTGGAGCCG CGGCACTGGA CGCACAGCCG GTTGACCTGC
GCGGCAGGGC TGCTCGCCTT GGCCGGCGTG GACGGCGCCG GGGTGGGGGA GGCCGACGGC
TGGCGGGCGC TGGCAAGGCG GCTGCTCAGC GCCGCCCGCG AGGAGATGCG GCATTCGAGC
GGGCGCTGGC AGCGGGCGAC CGACGACCCG CGGGTGGACG CGGCGCTGCT GCTGCCCGCG
GTGCGGGGAG CGGTCGACGT CCGCGACCCG GTGTCGGTGG CGACGCTGCG GGCGGTGGCC
GAGCAGCTGA CCGACGACGG CTACGTCTAC CGATTCGATC ATGCCGGGAT CCGGCTCGGG
GTGGCCGAAG GGGCCTTCCT GCTGTGCGGC TTCTGGCTGG CGCTGGCCTA CCACCGTGCC
GGCCGGCACG ATCAGGCCCG GCGGTACTTC GAGCGTGGCC GCGCCGCCTG CGGGCCGCCC
GGCATCTACG CCGAGGAGTT CGATGTCACT CAGCGCCAGC TGCGTGGCAA CATTCCCCAG
GCGTTCGTCC ATGCCCTGGT TCTGGAGACT GCCGCCACCC TCCGACCCCT CGACGGCACC
GACCCGGGAT GA
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| Protein sequence | MTAERSERDD NPGLVPTLRE FALLADGERG ALIGPDGRVC WMCVPSWADD AVFSTLIGGA
GSYSVTPATA FTWGGYYEDR SLIWHSRWVT RAGVAECREA LALPGRRHRA VLLRRILGVE
GTVPVRVTLD PRPGFGRRAV AGLRQDGLDG PDGVEAWCGR VGELELRWSG RLAAVARIDH
DAGGGSLVAE RLVRAGDCLD LVLELGELPA DRPVPDVLWA ETKRAWRSAV PELSSLAGVR
DAQHAVAVLR GLTGGGHGMV AAASTSLPER ARQGRDYDYR YVWIRDQCYA GLAAARAGLD
GLLDDAVTFV TERLLADGPN LRPAYTARGG PIPDERRLDL PGYPGGDDVV GNKVGHQFQL
DVFGEAALLL AAAARRGRLT DDARRAAAVT AGVIAARWRI PDTGVWELEP RHWTHSRLTC
AAGLLALAGV DGAGVGEADG WRALARRLLS AAREEMRHSS GRWQRATDDP RVDAALLLPA
VRGAVDVRDP VSVATLRAVA EQLTDDGYVY RFDHAGIRLG VAEGAFLLCG FWLALAYHRA
GRHDQARRYF ERGRAACGPP GIYAEEFDVT QRQLRGNIPQ AFVHALVLET AATLRPLDGT
DPG
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