Gene Francci3_2477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2477 
Symbol 
ID3904855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2921638 
End bp2922564 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content70% 
IMG OID637879807 
Producthypothetical protein 
Protein accessionYP_481573 
Protein GI86741173 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.620452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0887109 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCACTG CAGCGGTGGT CGCGACCGAC GCGGGCCTGT CGTGGGACCT GGTCCGCGAC 
GTTCGGCAGA TGTTCGCCTA CCCGTTCATG GTGAACGCGT TCCGGGCCGG AACCATCGTC
GCGCTGACCG CCGGGGCAAC CGGATGGTTC ATGGTCCTAC GCCGCCAGGC CTTCGCCGGC
CACACCCTCG CCGTGGCCGG TTTCCCGGGC GCGGCCGGGG CGATCTGGCT CGGCTTGGGC
GCGACCTACG GCTACTTCGC CTTCTGCCTC ACCGCGGCGC TGATCATCGC GGCCATCCCC
GGGGCGGGCG GGGCAGCCGC CGGGCGGGCC GCGGAGTCGG CCACCATCGG TACCGTCCAG
GCGTTCGCGC TGGCCTGCGG ATTCCTGTTC GTCAGCCTGT ACAAGGGATT CCTCGGCGGG
GTCAACACGC TGCTGTTCGG CAGCTTCCTG GGAATCACCG ACGACATGGT CCTCACGCTG
ACCGCCGTCG CCGTGGCGGT CCTGGCAGTG CTGGCGCTCA TCGGGCGGCC GCTGCTGTTC
GCCTCGCTCG ATCCAGCCGT GGCTGCCGCC GCCGGAGTGC CGGTGCGGGG TCTGTCGGTG
GCTTTCCTGA TCATGCTCGG GAGCACCGCC GCGGAGGTCA GCCAGATCAC CGGAACCCTC
CTCGTCTTCA CCCTGCTGGT CATCCCGGCC GCGACCGCAC AGGTCCTCAC CACCCGACCG
GCCCTCAGCC TCACGCTCAC CGTGCTGCTA GGCCTGCTGG TCACCTGGGC CGGGCTGACC
GTGGCCTACT ACTCGCCCTA TCCGATCGGC TTTTTCATCA CCAGCTTCTC CTTCGGCCTG
TACCTCCTCG CCCGTCTCGC CGTCGGCGCG CACGACCTGC TCGGCCGGGC CGCCCGCGTC
CCCCGGATGA CCGGAGCAGC AGCATGA
 
Protein sequence
MITAAVVATD AGLSWDLVRD VRQMFAYPFM VNAFRAGTIV ALTAGATGWF MVLRRQAFAG 
HTLAVAGFPG AAGAIWLGLG ATYGYFAFCL TAALIIAAIP GAGGAAAGRA AESATIGTVQ
AFALACGFLF VSLYKGFLGG VNTLLFGSFL GITDDMVLTL TAVAVAVLAV LALIGRPLLF
ASLDPAVAAA AGVPVRGLSV AFLIMLGSTA AEVSQITGTL LVFTLLVIPA ATAQVLTTRP
ALSLTLTVLL GLLVTWAGLT VAYYSPYPIG FFITSFSFGL YLLARLAVGA HDLLGRAARV
PRMTGAAA