Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2477 |
Symbol | |
ID | 3904855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2921638 |
End bp | 2922564 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637879807 |
Product | hypothetical protein |
Protein accession | YP_481573 |
Protein GI | 86741173 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.620452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0887109 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCACTG CAGCGGTGGT CGCGACCGAC GCGGGCCTGT CGTGGGACCT GGTCCGCGAC GTTCGGCAGA TGTTCGCCTA CCCGTTCATG GTGAACGCGT TCCGGGCCGG AACCATCGTC GCGCTGACCG CCGGGGCAAC CGGATGGTTC ATGGTCCTAC GCCGCCAGGC CTTCGCCGGC CACACCCTCG CCGTGGCCGG TTTCCCGGGC GCGGCCGGGG CGATCTGGCT CGGCTTGGGC GCGACCTACG GCTACTTCGC CTTCTGCCTC ACCGCGGCGC TGATCATCGC GGCCATCCCC GGGGCGGGCG GGGCAGCCGC CGGGCGGGCC GCGGAGTCGG CCACCATCGG TACCGTCCAG GCGTTCGCGC TGGCCTGCGG ATTCCTGTTC GTCAGCCTGT ACAAGGGATT CCTCGGCGGG GTCAACACGC TGCTGTTCGG CAGCTTCCTG GGAATCACCG ACGACATGGT CCTCACGCTG ACCGCCGTCG CCGTGGCGGT CCTGGCAGTG CTGGCGCTCA TCGGGCGGCC GCTGCTGTTC GCCTCGCTCG ATCCAGCCGT GGCTGCCGCC GCCGGAGTGC CGGTGCGGGG TCTGTCGGTG GCTTTCCTGA TCATGCTCGG GAGCACCGCC GCGGAGGTCA GCCAGATCAC CGGAACCCTC CTCGTCTTCA CCCTGCTGGT CATCCCGGCC GCGACCGCAC AGGTCCTCAC CACCCGACCG GCCCTCAGCC TCACGCTCAC CGTGCTGCTA GGCCTGCTGG TCACCTGGGC CGGGCTGACC GTGGCCTACT ACTCGCCCTA TCCGATCGGC TTTTTCATCA CCAGCTTCTC CTTCGGCCTG TACCTCCTCG CCCGTCTCGC CGTCGGCGCG CACGACCTGC TCGGCCGGGC CGCCCGCGTC CCCCGGATGA CCGGAGCAGC AGCATGA
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Protein sequence | MITAAVVATD AGLSWDLVRD VRQMFAYPFM VNAFRAGTIV ALTAGATGWF MVLRRQAFAG HTLAVAGFPG AAGAIWLGLG ATYGYFAFCL TAALIIAAIP GAGGAAAGRA AESATIGTVQ AFALACGFLF VSLYKGFLGG VNTLLFGSFL GITDDMVLTL TAVAVAVLAV LALIGRPLLF ASLDPAVAAA AGVPVRGLSV AFLIMLGSTA AEVSQITGTL LVFTLLVIPA ATAQVLTTRP ALSLTLTVLL GLLVTWAGLT VAYYSPYPIG FFITSFSFGL YLLARLAVGA HDLLGRAARV PRMTGAAA
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