Gene Francci3_2466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2466 
Symbol 
ID3905078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2907969 
End bp2909015 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content58% 
IMG OID637879796 
ProductParB-like nuclease 
Protein accessionYP_481562 
Protein GI86741162 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.355626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0925019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTTCTG AAAACGGGAC GGAAGGGCGC GGAGGCGATG GCTGGTCCTA TCTGAGAAAA 
CTGCTGAACG AACTACAGAA CACCACCGTT GAGCTACTAC CGATAAATTC ACTCACCACC
TCCGAGTCGC TTCGCGTGGC CGGCGAGGTC GGGCATCATG TCAAGATACT GGCCGAGACG
GAAGCCGTGT TGCCGCCGAT CATCGTGCAT CGGGGATCGA TGAGGGTGGT CGATGGAATA
CACCGGCTAC GGGCCGCCGC GATTCGTGGT GAGGAAGATA TCAGGGTGCA GTTCTTTGAT
GGCAACGTCG AAGACGCTTT TCTCCTGGCG GTCGCCGCAA ACGTCACGCA CGGCCTGCCG
CTCACGATGG CGGATCGGGT GGCCGCTGCG AAGCGTATTA TCGCGTGCCG TCCGCAGTGG
TCGGACAGAG CTGTGGCCTC GGTAGTCGGA GTTTCCGCGA AAAAAATCTC GGAAATCCGC
CAGAGCCTGG CCGAAAGTGT CCCTCAGTTC ACGAGCAGGA TTGGTATGGA TGGGCGTACG
AGGCCGTTGA GCTTTGTGGA GGGCAGGGAG CGGGCCAGCG AACTGATCAA AGCAAATCCC
GCCGCCTCTC TTCGGCAGAT CGCAAGGGAA GCCGGAATCT CTCCGACTAC GGTGGCGGAC
GTAAAGAATC GAGTTCTCCG GGGAGCAAGC CCGGTCCCCG TAAAGCAGCG GAACGTCGAC
ACGGTGGACC TCAGGCGACG CATGGCGATG CGTAAAAGCC TCAGCTCGGG ACGAAAAGAG
AGGAGATCGC TGGATGAACT TTTCTCTCTC TTTGATGTTC TGCGGAAGGA TCCGTCACTG
AGGTACAACG AGGTAGGAAG GATGGTGCTT CACGTCCTGA GCTACTGCAC GGTCACGGCT
CGGGAGAAAA AAAAGATCAT CGAAAACGTT CCACCCCACT GTAGGGAAGC TATCGCCGAT
CTCTTCTCTG GGTATGCTGA TATATGGTGC CTGCTCGCGG AGGAACTCCG GGACGGCGAG
CATCGTGTCT CCTCGGAGGC AGAGTAG
 
Protein sequence
MISENGTEGR GGDGWSYLRK LLNELQNTTV ELLPINSLTT SESLRVAGEV GHHVKILAET 
EAVLPPIIVH RGSMRVVDGI HRLRAAAIRG EEDIRVQFFD GNVEDAFLLA VAANVTHGLP
LTMADRVAAA KRIIACRPQW SDRAVASVVG VSAKKISEIR QSLAESVPQF TSRIGMDGRT
RPLSFVEGRE RASELIKANP AASLRQIARE AGISPTTVAD VKNRVLRGAS PVPVKQRNVD
TVDLRRRMAM RKSLSSGRKE RRSLDELFSL FDVLRKDPSL RYNEVGRMVL HVLSYCTVTA
REKKKIIENV PPHCREAIAD LFSGYADIWC LLAEELRDGE HRVSSEAE