| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2452 |
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| Symbol | |
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| ID | 3905064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2859542 |
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| End bp | 2860867 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637879782 |
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| Product | aminotransferase, class I and II |
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| Protein accession | YP_481548 |
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| Protein GI | 86741148 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.410489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACAA CCCATTACCC GCGCAAGGAA GACCTGCGCA AGGAAGACCT GCACTCCAGC
GTCGCCGATC CCGTCATGGA CACGATGAAC TTTCTCAACG AGGTCACCGT GCGTTTCCCC
ACGGCGATCT CGTTCGCTCC TGGACGGCCC TATGACGGCT TCTTCGACAT CGAGCAGATC
TTCACGCAGG TGCGGCGTTA TCTCGATCAC CTGGCCGAGC GGGGCGACTC GCCAGCTCAG
ATCCGCGACG CCCTGTTCCA GTACGGCCCG TCCGCCGGAC AGATCCGGAA GCTGATCGCC
GAATCACTCC GGGTGGACGA GGGCATCGAC GTGCCGCCGG AGTCCATCGT GGTCACGGTC
GGCTGCCAGG AGGCGATGTT CCTGGCGCTG CGGGCGCTCA TGCGGGACCC GGGCGACGTG
CTGGTCGTCT CCAGCCCGTG CTACGTGGGG ATCACCGGCG CGGCCCGGCT GTTGGACATC
GAGGTGACCC CGGTCGAGGA ACGGGCGGAC GGGCTGCACT GCGCCGATCT GGCGGCCGCG
GTCGCGGCCG AGCGGGCGCG CGGGCGCCGG GTCAGGGCCG TCTACGTGGT CCCCGACCAC
TCCAACCCCT CCGGGGTGAC CATGCCGCTG CCGGCCCGGC GGGCGCTGCT CGACCTGGCC
GTACGCCTTG ACCTGCTGAT CCTTGAGGAC AGCCCGTACC GGCTGGTCAG CCCGGGCCCG
CAGGTGCCGA CGCTGAAGTC GCTCGATCCG GCGCGCCGGG TGATCCACCT CGGCTCCTAC
TCCAAGACGG TCTTCCCGGG GGCCCGCGTC GGATTCGCGG TCGCCGACCA GGTGGTGCGG
GACGCCTCCG GAGGGACCGG GCTGCTGGCC GACGACCTCG CCAAGATCAA GAGCATGGTC
ACGGTGAACA CCTCGCCGCT CAGCCAGGCC GCCATCGCCG GGGCCCTGCT CGCCGCCGAC
GGCCGGATCT CCGAGCTGAA CGGCGAGACC TCGGCCTACT ACGGCGACAC CATGCGCGCC
ATGCTGCAGT GCCTGGACAA GCACCTGCCG GCCGAGCGGC GGGCCGAGCG CGGGGTGAGC
TGGAACTCAC CCCGCGGCGG ATTCTTCCTG ACCATGCGGG TGCCGTTCCG TGCCGACAAT
GCCGCGCTGA CCCGTTCGGC GCAGGACTTC GGGGTTATCT GGACGCCGAT GTCCTACTTC
TATCCGAAGG GCGGCGGCGA CCACAGCATC CGGCTGTCCA CCAGCTACCT GACCCGCTTC
GACATCGAGG AGGGCATCGC GCGGCTGGTC GGCTTCGTGG AGTCGCAGGC CAACCCGCCG
CGCTGA
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| Protein sequence | METTHYPRKE DLRKEDLHSS VADPVMDTMN FLNEVTVRFP TAISFAPGRP YDGFFDIEQI
FTQVRRYLDH LAERGDSPAQ IRDALFQYGP SAGQIRKLIA ESLRVDEGID VPPESIVVTV
GCQEAMFLAL RALMRDPGDV LVVSSPCYVG ITGAARLLDI EVTPVEERAD GLHCADLAAA
VAAERARGRR VRAVYVVPDH SNPSGVTMPL PARRALLDLA VRLDLLILED SPYRLVSPGP
QVPTLKSLDP ARRVIHLGSY SKTVFPGARV GFAVADQVVR DASGGTGLLA DDLAKIKSMV
TVNTSPLSQA AIAGALLAAD GRISELNGET SAYYGDTMRA MLQCLDKHLP AERRAERGVS
WNSPRGGFFL TMRVPFRADN AALTRSAQDF GVIWTPMSYF YPKGGGDHSI RLSTSYLTRF
DIEEGIARLV GFVESQANPP R
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