Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2443 |
Symbol | |
ID | 3905055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 2837984 |
End bp | 2838706 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637879773 |
Product | putative phage-related terminase large subunit |
Protein accession | YP_481539 |
Protein GI | 86741139 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.278617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAACC CCAGCCTTTC GCCGGCCTAC GTCGAGGCGC TGAAGAAGGA GTACGTCGGC CTCTGGTATG CCAGGTTCGT CGAGGGGCGC TGGATCATGG CTGAGGGTGT CGTGTACGAC ATGTGGGACG AGGACCGCAT GGTCGAAGAC GAAATCCCCA GTATCGTGCG CTGGGTAGGC ACGGGCGTGG ACCACGGCCA AGTTAATCCG TTCAACGCCA TCGTCGGCGG CATCGGGGTG GACCGCCGCC TTCACCTGGT GGCCGAATAC CGGTACGAGT CGAAGCTCGC GCGCAGACAG AAGACCGACG CCGAGTACTC GATGGCGTTG CAGGAGTTCC ACGCGCAGGT ACCGATCCCG GGTACGAGCC TTCGGGGTGT GCGACCGGAG TACATCTGCG TCGACCCCTC GGCCGCGTCG TTCGTGACCC AGCTCTACCG AGACGGTGTC AGCGGCGTGA TGAACGCAGA CAACGCGGTT CTCGACGGTA TCCGCATGGT GGCGTCGCTG ATGGGCAACG ACCGGCTTCG CGTGCACCGG TCCGTGAAGG GCTGGCGGGA AGAGGTCGGC TCGTATGCCT GGGACGATGA CGCTTCGGAG CGCGGCGAGG AACGTCCGGT GAAGACCGAG GACCACGCGA TGGATAGCGC ACGGTATCTA ATCAAGAGCA CAGAGCCACT GTGGTACAGC ACTCTCCGTC AGCCGCTCCA GCCTGCCGCG TAG
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Protein sequence | MDNPSLSPAY VEALKKEYVG LWYARFVEGR WIMAEGVVYD MWDEDRMVED EIPSIVRWVG TGVDHGQVNP FNAIVGGIGV DRRLHLVAEY RYESKLARRQ KTDAEYSMAL QEFHAQVPIP GTSLRGVRPE YICVDPSAAS FVTQLYRDGV SGVMNADNAV LDGIRMVASL MGNDRLRVHR SVKGWREEVG SYAWDDDASE RGEERPVKTE DHAMDSARYL IKSTEPLWYS TLRQPLQPAA
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