Gene Francci3_2439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2439 
Symbol 
ID3905051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2834512 
End bp2835189 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content71% 
IMG OID637879769 
Producthypothetical protein 
Protein accessionYP_481535 
Protein GI86741135 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.265104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.897623 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGGCAT CATCGGTGCT GTGTGACGCC GAACTGCTGA CGACCGTCTT CCCTCAGCTG 
GCCGCCGTGC TGGTCCAGCG CGTTGTCGAT GAGGGGCGCA GGGTGCGGGT CGTTGCCCGG
ACCCGGGCGG ATCCGGTGCC CTGTCCGCGA TGCGGGACCC GCACCGAGCG GGTGCATGGC
TATCACCGGC GCTGGCTCAC CGACCTGCTC CGCAAGGCCA ACACCCTCGT CGTCACCGCC
CGCGCCGCCG GGAACAGCCG CCTCGACCAG AAGACGATCG ACGCGCTGCG GGCCCGCTAC
GACGCCGACG TCCGGATCGG CGAACTGACG AACCTGTCCC GTCCCTGGAC CGACGAGAAG
AACCATCCCG GCCTGGTCCT GGCCCGACGG CTCGCCGCGA AGGCCGACCA GGTCTGGCTC
TTCACCACCA ACTTCACGAT CCCCTGGACG AACAATCCCA GCGAGCAGGC GATCAGGCTC
CCGAAACGCC ACCAGGCCGT CTCGGGCTAC TGGCACACCC CCACCACCCT GGCCGCCTAC
CTCCGCGTGC GCTCCTACCT CGTCTCCGCC CGCGACCACG GCCTGACCGC CGTCGACGCC
ATCCGCCTCG CCCTCGCCGG TACGCCCTGG ATGCCAGCCA GGCGCGCGGC CAGCCCCACA
CACGCTCTCG CCGCCTAA
 
Protein sequence
MRASSVLCDA ELLTTVFPQL AAVLVQRVVD EGRRVRVVAR TRADPVPCPR CGTRTERVHG 
YHRRWLTDLL RKANTLVVTA RAAGNSRLDQ KTIDALRARY DADVRIGELT NLSRPWTDEK
NHPGLVLARR LAAKADQVWL FTTNFTIPWT NNPSEQAIRL PKRHQAVSGY WHTPTTLAAY
LRVRSYLVSA RDHGLTAVDA IRLALAGTPW MPARRAASPT HALAA