Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2422 |
Symbol | |
ID | 3906405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 2813086 |
End bp | 2814372 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637879752 |
Product | putative secreted protein |
Protein accession | YP_481518 |
Protein GI | 86741118 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0376537 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0559574 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCGG TGGCTACGGG GGTACGGCGC CGGGCGGCGA CCCCGCCGGG CCGGCTGCGC CTGCTGTCCG TGCTCGTGGT CCTCGCGCTC GTCGCACTGT GGGTTACCGC CCTCGGCGCC ACGCAGACCC GCCGGCACGC GATCGACACC CTGACCAAGG ACAGCGGCGC GTCCTTCATC GCCGCCCAGA GCCTGCGCGC CGAGCTCTGG GCGGCGGACG CCACGGCGGC CCGTGCCTTC CTCGCCGGCG GCGTCGAACC ACCGGGGCAG CGTGCCGCCT ACGCGCGCAG CATCGCCGCG GCGGGCGACC GCGTCGTCGA TCTCGCCCGC GCCGGTGGTC CGCGCCAGCC CCTGGCCGTG CTCTGCGCGC AACTGCCCGT CTACACCGGC CTGGTCGAAC GGGCCCGGGC GAACAACCGG CTCGGCCTCG CCGTCGGCGG GGCCTACCTG CGGCAGGCGT CCGCGCTGAT GCGGGACACC ATCCTGCCCG CCGCCGACGC GCTGGCCACC GCCGACGCCA CCGACATCGA CCACGGCTAC CGGCGGGCGA GCTCCTGGCA CCAGGTGTTC CTGGTCGGCG CCGTCGGCGC CGCGACGCTC GCCGGGCTCG TCGCGCTGCA GGTGCGGCTG TTCCGGCGCA CCCACCGGAT CCTCAATCTG CCGCTGCTCG CCGCCACGGC GCTCACCGCG ATCATCCTCG GGTTGACGCT GACCGCGTTC GGCGTGGAAC GTGGCCGTCT CGTCGAAAGC CGGGACCACG GGTACGTCCC GATGACGCTG ACCGCGCAGG CCCGGGTGCT GGCATTACGG GCATGGGGTG ACGAAAGCCT GTCGCTGGTC GCCCACGGCA ACGGCGTGGA ACTCGACGAG GACGCCCGCG CCGCGGCCGC CCGACTGGGC TACGACGACA GGGGGCGCCG GAGCGGGACC GGGGTTCTGC CGGCGACGGT GGCCCTGCGC GGCCCGGACG GCCCGGCCCG CGCCGCCCTG GAACCGGCCT GGCGCGGATA CCAGGCGACA AGCCTGCGGG TCGGTAACCT GGTGTCCGAT GTCGGCGGGT TCCAGCAGGC GGTGGCCGTG GCGCTCGGCG AGGGCACGAC CTCCTTCACC CGGTTCGACG ACGCCTCGGA AGCGGTGTTC ACGACCAGCC GTACCCGCTT CGAAGCGCGC CTGTCCGCCG CCGGCGAGGC GCTGAACCGC CTGCCGCTCG GCGCCACCGT GGCGCTCGGG CTCGCCGCGG CCCTGGCCTT CGTCGGCATC CAGCTGAGAA TCAACGACTA CCGGTGA
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Protein sequence | MTAVATGVRR RAATPPGRLR LLSVLVVLAL VALWVTALGA TQTRRHAIDT LTKDSGASFI AAQSLRAELW AADATAARAF LAGGVEPPGQ RAAYARSIAA AGDRVVDLAR AGGPRQPLAV LCAQLPVYTG LVERARANNR LGLAVGGAYL RQASALMRDT ILPAADALAT ADATDIDHGY RRASSWHQVF LVGAVGAATL AGLVALQVRL FRRTHRILNL PLLAATALTA IILGLTLTAF GVERGRLVES RDHGYVPMTL TAQARVLALR AWGDESLSLV AHGNGVELDE DARAAAARLG YDDRGRRSGT GVLPATVALR GPDGPARAAL EPAWRGYQAT SLRVGNLVSD VGGFQQAVAV ALGEGTTSFT RFDDASEAVF TTSRTRFEAR LSAAGEALNR LPLGATVALG LAAALAFVGI QLRINDYR
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