Gene Francci3_2422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2422 
Symbol 
ID3906405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2813086 
End bp2814372 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content75% 
IMG OID637879752 
Productputative secreted protein 
Protein accessionYP_481518 
Protein GI86741118 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0376537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0559574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGG TGGCTACGGG GGTACGGCGC CGGGCGGCGA CCCCGCCGGG CCGGCTGCGC 
CTGCTGTCCG TGCTCGTGGT CCTCGCGCTC GTCGCACTGT GGGTTACCGC CCTCGGCGCC
ACGCAGACCC GCCGGCACGC GATCGACACC CTGACCAAGG ACAGCGGCGC GTCCTTCATC
GCCGCCCAGA GCCTGCGCGC CGAGCTCTGG GCGGCGGACG CCACGGCGGC CCGTGCCTTC
CTCGCCGGCG GCGTCGAACC ACCGGGGCAG CGTGCCGCCT ACGCGCGCAG CATCGCCGCG
GCGGGCGACC GCGTCGTCGA TCTCGCCCGC GCCGGTGGTC CGCGCCAGCC CCTGGCCGTG
CTCTGCGCGC AACTGCCCGT CTACACCGGC CTGGTCGAAC GGGCCCGGGC GAACAACCGG
CTCGGCCTCG CCGTCGGCGG GGCCTACCTG CGGCAGGCGT CCGCGCTGAT GCGGGACACC
ATCCTGCCCG CCGCCGACGC GCTGGCCACC GCCGACGCCA CCGACATCGA CCACGGCTAC
CGGCGGGCGA GCTCCTGGCA CCAGGTGTTC CTGGTCGGCG CCGTCGGCGC CGCGACGCTC
GCCGGGCTCG TCGCGCTGCA GGTGCGGCTG TTCCGGCGCA CCCACCGGAT CCTCAATCTG
CCGCTGCTCG CCGCCACGGC GCTCACCGCG ATCATCCTCG GGTTGACGCT GACCGCGTTC
GGCGTGGAAC GTGGCCGTCT CGTCGAAAGC CGGGACCACG GGTACGTCCC GATGACGCTG
ACCGCGCAGG CCCGGGTGCT GGCATTACGG GCATGGGGTG ACGAAAGCCT GTCGCTGGTC
GCCCACGGCA ACGGCGTGGA ACTCGACGAG GACGCCCGCG CCGCGGCCGC CCGACTGGGC
TACGACGACA GGGGGCGCCG GAGCGGGACC GGGGTTCTGC CGGCGACGGT GGCCCTGCGC
GGCCCGGACG GCCCGGCCCG CGCCGCCCTG GAACCGGCCT GGCGCGGATA CCAGGCGACA
AGCCTGCGGG TCGGTAACCT GGTGTCCGAT GTCGGCGGGT TCCAGCAGGC GGTGGCCGTG
GCGCTCGGCG AGGGCACGAC CTCCTTCACC CGGTTCGACG ACGCCTCGGA AGCGGTGTTC
ACGACCAGCC GTACCCGCTT CGAAGCGCGC CTGTCCGCCG CCGGCGAGGC GCTGAACCGC
CTGCCGCTCG GCGCCACCGT GGCGCTCGGG CTCGCCGCGG CCCTGGCCTT CGTCGGCATC
CAGCTGAGAA TCAACGACTA CCGGTGA
 
Protein sequence
MTAVATGVRR RAATPPGRLR LLSVLVVLAL VALWVTALGA TQTRRHAIDT LTKDSGASFI 
AAQSLRAELW AADATAARAF LAGGVEPPGQ RAAYARSIAA AGDRVVDLAR AGGPRQPLAV
LCAQLPVYTG LVERARANNR LGLAVGGAYL RQASALMRDT ILPAADALAT ADATDIDHGY
RRASSWHQVF LVGAVGAATL AGLVALQVRL FRRTHRILNL PLLAATALTA IILGLTLTAF
GVERGRLVES RDHGYVPMTL TAQARVLALR AWGDESLSLV AHGNGVELDE DARAAAARLG
YDDRGRRSGT GVLPATVALR GPDGPARAAL EPAWRGYQAT SLRVGNLVSD VGGFQQAVAV
ALGEGTTSFT RFDDASEAVF TTSRTRFEAR LSAAGEALNR LPLGATVALG LAAALAFVGI
QLRINDYR