| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2420 |
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| Symbol | |
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| ID | 3906403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2810741 |
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| End bp | 2811610 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637879750 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_481516 |
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| Protein GI | 86741116 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.133265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.176443 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCCCCG TGCTCGATGT AACGGCTTTG CGAAGTTTCG TCACCATTGC CGACTGCGGG
GGCTTCCGCC GCGCCGCGCA CCTGCTGTGT ATCTCGCAGT CCGCCGTGAG CCAGCATGTC
CGCCGGTTGG AGAAGGCGAT CGGCCGCCCG CTGGTCGAGC CGGACGGTCG CGCCACCCGG
TTCACTCCGG ATGGTGAGCT GCTCCTGACC GCGGCCCGGC GGATCCTCGC CCTGCACGAC
GGCGCGCTCG AGCAGCTGGG GGTCGGCCGG CGGGAGGGCG GCGCGCCCGC GGAGCTTCGG
ACGATCACCG TCGGGGCGAC CGAGCACGCC GCCGACCATC TGCTGCCGTT GTGGATGTCC
ACCCTGACCA CCGGTTTTCC CGAGGCTCAG ATCCGGTTCC GCCTCGACCG GGGAGCCCGG
CTCACCGAGG CCCTCGACCA GGGTGCCGTC GACGTCGCCG TGCTCCTGGG AACGGCACGG
GGCGCGGTGG CCCGCCCCGC CGGCTGCCTT CCCCTCGCCT GGTACGCCGC CGCCGGCTGG
ACTCCTCCGC CGCCGGACCG GCCGCTGCCC CTCGTGGCGA TCAACGATCC CTGCACCATT
CGCAGCCAGG CGTTGAGCAC CCTGGCGCGG GTCGGGCGCA CGGCATGGGT GGTCGGTGAG
GCAGGCCATC TCGCCGGTGT GCTGCACGCC GCCCGCGCCG GGGTCGGGGT GGCTCTGCTC
GCCGACGTCG GGCCGGTTCC CCCGGGGCTC GAACGGCGCC ACGACCTGCC CGCCGTTGCG
CCCGAACCCC TGCACGTGCG CGTGCGTCGC GGAGCGCCAC CGCGGCTGGG CCAGCTGGTC
GGTGACGCCG TCGAGGCCGC CCTGGCCTGA
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| Protein sequence | MSPVLDVTAL RSFVTIADCG GFRRAAHLLC ISQSAVSQHV RRLEKAIGRP LVEPDGRATR
FTPDGELLLT AARRILALHD GALEQLGVGR REGGAPAELR TITVGATEHA ADHLLPLWMS
TLTTGFPEAQ IRFRLDRGAR LTEALDQGAV DVAVLLGTAR GAVARPAGCL PLAWYAAAGW
TPPPPDRPLP LVAINDPCTI RSQALSTLAR VGRTAWVVGE AGHLAGVLHA ARAGVGVALL
ADVGPVPPGL ERRHDLPAVA PEPLHVRVRR GAPPRLGQLV GDAVEAALA
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