Gene Francci3_2396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2396 
Symbol 
ID3906379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2774609 
End bp2775001 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content71% 
IMG OID637879726 
Producthypothetical protein 
Protein accessionYP_481492 
Protein GI86741092 
COG category[S] Function unknown 
COG ID[COG3651] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0142528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0780457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGATG AACGGAACGT TCTCGGTGGG GAACTGGAGC CCTGCGGCAC CGATCCGGTG 
ACCGGCTTCT ACCGCGACGG GTGCTGCAGC ACCGGTCCGG AGGATCTCGG TAGCCATACC
GTGTGCGCGG TGGTCACCAC CGAGTTCCTA CGGCACCAGC GGCAGGTCGG CAACGACCTG
TCGACGCCCC GACCCGAGTA CTCCTTCCCC GGCCTGCGCC CGGGTGACCG CTGGTGCGTG
GTCGCGGTAC GGTGGCTGCA GGCCTATGAG GCGGGGGCCG CCGCGCCTGT CGTGCTGGCC
TCGACGCACG AACGCGCCCT GGAGGTCATC CCGCTGGAGG CGCTGCGCGC CCACGCCGTT
GACGTGCCCG CCGACCCACG ATCACTCGGC TGA
 
Protein sequence
MADERNVLGG ELEPCGTDPV TGFYRDGCCS TGPEDLGSHT VCAVVTTEFL RHQRQVGNDL 
STPRPEYSFP GLRPGDRWCV VAVRWLQAYE AGAAAPVVLA STHERALEVI PLEALRAHAV
DVPADPRSLG