| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2356 |
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| Symbol | |
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| ID | 3904563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2730584 |
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| End bp | 2732509 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 637879686 |
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| Product | DNA primase catalytic core-like |
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| Protein accession | YP_481452 |
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| Protein GI | 86741052 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0899243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.576485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGAGCG GACCGGGACC GGTCGAGCCG CAGGTCGCTG CCCACCTGTC GGCCGCGGCC
GCGCAGGCGG GCAGCCGCGA CGGCTGGGCC CGGTGGCTGG CGCTGGCCGG GCAGGCCCGC
ACGCGAGCAA ACCCGGTGCG GGACGCTGCC CTGCTCGTCG ACCCGCTGAC CCGCCTGTTC
CACGCCCGCG GCTACAGCCT CGCCGCCGGC GAGCGTGGCC AGGTGCGGGT GGACCGCGTC
CACCGCACGG TCACCCACCC CCCGACGTTC CTCGCGGATC TGGGGATCAT GCAGGATCTC
GCGCATGCCG CCGCCCACCT GATGCTGCAC CCGGATCTTG GCCCGCAGGT CGACTGCGTC
GGGCGGGACC GCGCCGAGGC GCTTAGCGTC GCCTACCTCG TCGCCGCCCA CGCCGGTGTC
CCCCTGCCCG TCCCTGATGC CCTGCCCGAT CCGCGGCAGT GGGCCGCCGG AGCGGATCCG
GCCGGCGTCG TCCGTGAGGC CACCCGTCGG GTGTGGAGCG CCGCCGACCG GCTGGGCCAT
GCTCTGGCTC CCGGCCCGCG CCCGGGTGCC CAGCAACTCC GCGAAGCACG CCGGCGCGCT
AACACTCCCC GGACCGAGGG CCTTGCCACC CGGGCGCGGA CGCTGCGCGT CCACGCGGAC
TCGTCGCTAC CGCCCCCACC CCGACAGGCC AGCGCCGAGC ATGCCCGGCT CTACGACGCG
ATCCGCGCAG CCGCCCGCTG GTACACCCTG CACCTCACCG GCGCCGCCGA CGGCCCGGCC
GGACGGATGC TCGCCGAGCG GGGCCTGGCC GACGTCGCGT CTGATCCGCG GTGGATGGTC
GGCTACGCCC CGCCCGGCTG GACCGGGCTC GTCGACCAAC TGCACGCCCT CGGGTTCACC
GAGCAGGAGC TGCTCGACGC CGGCCTGGCC GCTCGTACCC GCCGCGGCAC CCTGGTGGAC
CGGTTCCGTC ACCGGCTGCT GTTCGGCCTG CGTGACCCCG ACGGGCGGAT CGTCGGGTTC
ATCGGCCGGG CGCTTGACGG GCAGACCCCG AAATACCTCA ACAGCCCCAC TACGGTTCTC
TTCGACAAAA GTCGGCTGCT GTTCGGCCTG GCCGAGCAGC GCGACCTGCT CGCGGCCGGC
GCCCGGCCGG TCGTCGTGGA GGGGCCCACC GACGTGCTCG CCGTCGCCGT CGCCGCCCGC
CAGACCGGCC GGGCCCTGGC CGCGGTGGCG GCCTGCGGCA CCGCGTTCAC CGCCGACCAC
GCCCGTGTGC TGGGCTCCGC CACCCCCGGC CGGGACGGGA TCACCGTCGC CCACGACCCC
GACCCCGCCG GGCTGCGTGC CGCCGCCCGC GCCTACCAGG TGCTACGCGA CCTCGACACC
CGCCTGCACC ACGCCGACCT GCCCGCCGGG GCCGACCCCG CCGGGCTGCT GGCTACCGCC
GGCCCGGACG CGCTGCGCGC CGCGCTGAGC GACCCGGCGC GGCTACGGCC CCTGGCCGCC
GCCGTCATTG ACCAGCGCCT TGCCTGGCTC GACGACGACC ACCGCCGCTT CCTCGAACAT
CAGTTCACCG CCCTGCGGGC GGTGGCACCG ATCATCGCCA CCGAGGATCC CGCGCTCGTC
GGCGGACTCG TCTCCTATAC CGCCGGGCGT ATCGGCCTGG ACGCCAGTGA TGTCATCGGC
GCGGTCTTCG ACGCCGTCGG GGACCTGTCC GGCGCGGCGC TGGCCCGTCT GCACAGCGGC
ACCGGCAACC GGTCCGCCGC CGAGATCAGC GCCGCCGCTG CCCTGCCGGG TGCCGGGGGG
CCGCGGGCCG CGGCGGCGCT CGCCGCCGCC TACCCGTCCT CCACCCGCCC TGTCCTTGCC
GCCCTGTCCC TGCCGCCCCG GCCCGCCTCG GTGGACACCG CCGCCGACCA GTCCCGTGCC
CGCTGA
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| Protein sequence | MVSGPGPVEP QVAAHLSAAA AQAGSRDGWA RWLALAGQAR TRANPVRDAA LLVDPLTRLF
HARGYSLAAG ERGQVRVDRV HRTVTHPPTF LADLGIMQDL AHAAAHLMLH PDLGPQVDCV
GRDRAEALSV AYLVAAHAGV PLPVPDALPD PRQWAAGADP AGVVREATRR VWSAADRLGH
ALAPGPRPGA QQLREARRRA NTPRTEGLAT RARTLRVHAD SSLPPPPRQA SAEHARLYDA
IRAAARWYTL HLTGAADGPA GRMLAERGLA DVASDPRWMV GYAPPGWTGL VDQLHALGFT
EQELLDAGLA ARTRRGTLVD RFRHRLLFGL RDPDGRIVGF IGRALDGQTP KYLNSPTTVL
FDKSRLLFGL AEQRDLLAAG ARPVVVEGPT DVLAVAVAAR QTGRALAAVA ACGTAFTADH
ARVLGSATPG RDGITVAHDP DPAGLRAAAR AYQVLRDLDT RLHHADLPAG ADPAGLLATA
GPDALRAALS DPARLRPLAA AVIDQRLAWL DDDHRRFLEH QFTALRAVAP IIATEDPALV
GGLVSYTAGR IGLDASDVIG AVFDAVGDLS GAALARLHSG TGNRSAAEIS AAAALPGAGG
PRAAAALAAA YPSSTRPVLA ALSLPPRPAS VDTAADQSRA R
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