Gene Francci3_2348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2348 
Symbol 
ID3904555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2723010 
End bp2724044 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content66% 
IMG OID637879678 
Producthypothetical protein 
Protein accessionYP_481444 
Protein GI86741044 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.397132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.115491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCCT CGGACGAGTA CCGGAGCTAC GCCCACACGC TGGAAACTCT GCTTGCGCCC 
GGCGGGATCC TGTCGACCAG ATCTCCCTAC GCCACCGCAG ACCAGGCCCT GCCCGGTGGT
GTTCCCAGCG AGCAACGTGC CGCGATCTAT GACCGGGTCG TCGACCGCTA CCTGACAGCT
CACGTCGCCC AGCACGGCCA ACTGCCCCAT CCTGGCCGAC AGCTTAGCCT GATCGTCGGG
CCGCCTGGTG CCGGCAAATC CTCAGCCCTG ACCGCTGCCG GGGCCCAGGG GATGGAGCTG
TCCGGGACAC TGATGCTCGA ACGCGACGAG CTGATGCGCA TACTTCTACA CGAGCTGGCT
ACGCAGGGGA CTCTGCCTGT CCCTCACGAG CTACGTGACG GCCTCGACGG AATACCTGTC
GTACCCGCCG AACTCCATGA TCTGATCAAC GCCGAAGGAA CCTATCTCGC GCACAGAGTC
GCCGCCGTCG CACGGATGCA GGACTGGAAT GTCGGATGGC AGAACACCCT CGGAGATCTA
AGCGGAATGC AGGCCGGTAT CGCGGAGTTC CGTCGGGCCG GATACGGACC ACCACAGGCC
ATCTGCCTGG AGGCATCCGA GCAAGTTCTC CTCGACCGTA CCTACCAGCG GTGGGAAAGC
GGACGCCGTG ACGTAGAGGC CGGCCGCGAC ACTCTTGGCC GCCATTGGGT CACCCGCGCC
GGGCTGTCGA GTGCCTTCCG CGACCAGAAT GGATCGACAA CGACAACGCC GGCGAGCAGC
CACCGGCTCG CCGTTCTTGA GCAAAGCGGC CAGACCGGAC GCATCATCGT CATCAACACG
ACCGAGTTTC CCGGCCGCGT CGTGCACGAC ACCGCTACAC ACGGAGCTCT TCGAGAGCGT
ATTGCCCGGC CGGACGCGGC GAAGATCATA CGGCGGGCTT TCCCTCCCCC GGAGAGGACA
CCCCCTGGAC AGGATGGCAG GCGTCGGCCG CAGCCTCCCC CGGAGACGGG GAACTCACCG
CGGCCCCACC GATGA
 
Protein sequence
MASSDEYRSY AHTLETLLAP GGILSTRSPY ATADQALPGG VPSEQRAAIY DRVVDRYLTA 
HVAQHGQLPH PGRQLSLIVG PPGAGKSSAL TAAGAQGMEL SGTLMLERDE LMRILLHELA
TQGTLPVPHE LRDGLDGIPV VPAELHDLIN AEGTYLAHRV AAVARMQDWN VGWQNTLGDL
SGMQAGIAEF RRAGYGPPQA ICLEASEQVL LDRTYQRWES GRRDVEAGRD TLGRHWVTRA
GLSSAFRDQN GSTTTTPASS HRLAVLEQSG QTGRIIVINT TEFPGRVVHD TATHGALRER
IARPDAAKII RRAFPPPERT PPGQDGRRRP QPPPETGNSP RPHR