Gene Francci3_2340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2340 
Symbol 
ID3904547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2714245 
End bp2714805 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content72% 
IMG OID637879671 
Producthypothetical protein 
Protein accessionYP_481437 
Protein GI86741037 
COG category[R] General function prediction only 
COG ID[COG3545] Predicted esterase of the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.583534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.494066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCAG CGGGCGGCGG CGAGCCGGCG GTGACGTATG TCTTCATCGC CGGCATCGGG 
AACTCGGGGC CGGAGCACTG GCAGTACATG TGGTACAAGC GGGCCGGCAA CGGGGTCTGG
GTGGACCACG AGTCCTGGGA CAACCCGGTG CGCGACGCCT GGGTGAAGGA CCTCGACGAC
GTGCTCACGG CGATCGACGG GCCGAAGATC CTGATCGCGC ACAGCCTCGG CTGCACGCTG
GTCACCGAAT GGGCGTGCGA GCATGCCGAC GACGCCATCA CCGGGGCCTT CCTGGTGGCG
GTGCCGGACG TGGGCGGGCC GCGGTTCCCG ACCGGCGCGG TCGGGTTCGG CACGCCGCGA
CACGACCCGT TGCCCTTCCC GACCGTCATT GTCGCCAGCG AGAACGACCC GTACGGCTCG
CTGGCGCATT CCGTGGCGGC CGCCGGGAGG CTCGGCGCCC GACTGGTCAA CGTCGGCTCG
CGGGGCCACC TCAACGCGGA CTCCGGGCTG GCGGACTGGC CGGCGGGCTG GTCCGTCTTC
CGTGACCACT TCGCGGGCTG A
 
Protein sequence
MEPAGGGEPA VTYVFIAGIG NSGPEHWQYM WYKRAGNGVW VDHESWDNPV RDAWVKDLDD 
VLTAIDGPKI LIAHSLGCTL VTEWACEHAD DAITGAFLVA VPDVGGPRFP TGAVGFGTPR
HDPLPFPTVI VASENDPYGS LAHSVAAAGR LGARLVNVGS RGHLNADSGL ADWPAGWSVF
RDHFAG