Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2311 |
Symbol | |
ID | 3904845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 2689119 |
End bp | 2689793 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637879642 |
Product | hypothetical protein |
Protein accession | YP_481408 |
Protein GI | 86741008 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.254882 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0358095 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGCGG GCGTGGGAAA CACGTTGATC TCCATCCCGC CGGGGCGGGT GACGCTGTCC GACCGGCGAA CGCAGCGCAG CTGGTCGGTC GAGCTCGCGC CGTACTGTCT CGCGGCGTTT CCGGTCACCC AGGAGCAGTA CGCGGCGGTC GGCGGCCAGC GGCCGAGTTC GGCCCACGGG GACCGGTTGC CCGTCGAGGG GGTTTCCTGG TGGGACGCGG TCCGGTTCTG CAACGCCCTG TCCCACCGCG ACGGGATGGC GCCCGCGTAC CGTGTCCAGG CCGACGGCGA GGGTGTCGAG TGGGACACCC GCGCCGAGGG GTACCGGCTG CCGACCGAGG CTGAGTGGGA GTACGCCGCC CGAGCCGGCA CGAGCGGCCC GCGGTACGGG CCGCTCGACG ACATTGCCTG GTACCGCGGC AACTCCCACG GGCGAATCCA TGACGTGGGC GGCAAACAGC CCAACTCCTG GGGCCTGTAC GACATGCTGG GCAACGTGTG GGACTGGTGC TGGGACCTGT ACGACACCGA GGTCTACGGC ACCTATCGGG TGCTGCGGGG CGGCGGGTGG TTCGACGAGC ACTGGAGCTG CCGGGCCTCC GTACGCCGCC GCGGCCACCC GGCCTTCCAC CTCGACGACG TGGGGTTCCG CGTCGCGCGT TGCGCCGTGC CCTGA
|
Protein sequence | MDAGVGNTLI SIPPGRVTLS DRRTQRSWSV ELAPYCLAAF PVTQEQYAAV GGQRPSSAHG DRLPVEGVSW WDAVRFCNAL SHRDGMAPAY RVQADGEGVE WDTRAEGYRL PTEAEWEYAA RAGTSGPRYG PLDDIAWYRG NSHGRIHDVG GKQPNSWGLY DMLGNVWDWC WDLYDTEVYG TYRVLRGGGW FDEHWSCRAS VRRRGHPAFH LDDVGFRVAR CAVP
|
| |