Gene Francci3_2311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2311 
Symbol 
ID3904845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2689119 
End bp2689793 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content72% 
IMG OID637879642 
Producthypothetical protein 
Protein accessionYP_481408 
Protein GI86741008 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.254882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0358095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCGG GCGTGGGAAA CACGTTGATC TCCATCCCGC CGGGGCGGGT GACGCTGTCC 
GACCGGCGAA CGCAGCGCAG CTGGTCGGTC GAGCTCGCGC CGTACTGTCT CGCGGCGTTT
CCGGTCACCC AGGAGCAGTA CGCGGCGGTC GGCGGCCAGC GGCCGAGTTC GGCCCACGGG
GACCGGTTGC CCGTCGAGGG GGTTTCCTGG TGGGACGCGG TCCGGTTCTG CAACGCCCTG
TCCCACCGCG ACGGGATGGC GCCCGCGTAC CGTGTCCAGG CCGACGGCGA GGGTGTCGAG
TGGGACACCC GCGCCGAGGG GTACCGGCTG CCGACCGAGG CTGAGTGGGA GTACGCCGCC
CGAGCCGGCA CGAGCGGCCC GCGGTACGGG CCGCTCGACG ACATTGCCTG GTACCGCGGC
AACTCCCACG GGCGAATCCA TGACGTGGGC GGCAAACAGC CCAACTCCTG GGGCCTGTAC
GACATGCTGG GCAACGTGTG GGACTGGTGC TGGGACCTGT ACGACACCGA GGTCTACGGC
ACCTATCGGG TGCTGCGGGG CGGCGGGTGG TTCGACGAGC ACTGGAGCTG CCGGGCCTCC
GTACGCCGCC GCGGCCACCC GGCCTTCCAC CTCGACGACG TGGGGTTCCG CGTCGCGCGT
TGCGCCGTGC CCTGA
 
Protein sequence
MDAGVGNTLI SIPPGRVTLS DRRTQRSWSV ELAPYCLAAF PVTQEQYAAV GGQRPSSAHG 
DRLPVEGVSW WDAVRFCNAL SHRDGMAPAY RVQADGEGVE WDTRAEGYRL PTEAEWEYAA
RAGTSGPRYG PLDDIAWYRG NSHGRIHDVG GKQPNSWGLY DMLGNVWDWC WDLYDTEVYG
TYRVLRGGGW FDEHWSCRAS VRRRGHPAFH LDDVGFRVAR CAVP