Gene Francci3_2150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2150 
Symbol 
ID3905540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2518534 
End bp2519121 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content70% 
IMG OID637879485 
ProductIS630 family transposase 
Protein accessionYP_481251 
Protein GI86740851 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.263283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCGA GGACACCGTC AGCAAGTGGC GGGGCCGGTT CGCCCGCGAG GGCCTGGCGG 
GGTTGGCTGA CCGGCGCCGC TCGGGCCGGC CACGGTCCGC GGGTGGAGTT CGAGTACGAA
CGCGGCGGGA CGGTGGCCTA CTTCGCCGCC TACGACGTCC AGCGCGCCCA GGTCATCGGC
CGGATCGAGG ACACCACCGG GATCGTCCCT TTCGGCCGGC TCGCCGCCCA GGTCATGAAC
AGCGAGCCGT ACGCCTCGGC GCGGCGGGTG TTCTGGATCG TCGACAACGG CTCGTCCCAC
CGGGGCCAAG CCTCCATCGA CCGGATGCGC GCAGCCCACC CGACCGCGAC GCTGGTCCAC
CTGCCGGTCC ACGCGTCCTG GCTCAACCAG GTAGAGGTGT ACTTCTCGAT CCTGCAGCGC
AAGGCGATCG AGCGTGGCGA CCTCGCCGAC TTCGCCGACC TCGACGCGCT CGCCGCCCGC
GTCATGGGCT TCCAAACGCT CTACAACCAG ACCGCGACCC GGTTCGACTG GAAGTACACC
CGTGCGGACC TGCTGAAGAC CGCCAGCCGC CTCAACCTCG CCGCATAA
 
Protein sequence
MSARTPSASG GAGSPARAWR GWLTGAARAG HGPRVEFEYE RGGTVAYFAA YDVQRAQVIG 
RIEDTTGIVP FGRLAAQVMN SEPYASARRV FWIVDNGSSH RGQASIDRMR AAHPTATLVH
LPVHASWLNQ VEVYFSILQR KAIERGDLAD FADLDALAAR VMGFQTLYNQ TATRFDWKYT
RADLLKTASR LNLAA