| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2149 |
|---|
| Symbol | |
|---|
| ID | 3905539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 2516937 |
|---|
| End bp | 2517656 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637879484 |
|---|
| Product | putative O-methyltransferase |
|---|
| Protein accession | YP_481250 |
|---|
| Protein GI | 86740850 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0454012 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGCTGG CCGAGGACGG GCGTCTGGTG GTGCCGCTGC GGATCCTCGG GCTGACTCGA
ACGGTCGTGT TCGAGCGGGC CGGAGCGGTT CTACGGAGCC GGTCGGTCGT GGAGGACGGG
TTCATGCCGA TGCGTGCTCT CGGTGCCGTT CGCGAGCAGA ACATCCGGGT CGGTGCCGGC
CCGGACCTGA CAATTCGGCT CGATGACGAT CGCCCGGTGG ATGCCTCGGC GTTGCGGGGC
GCGTTGGATC ACCCTGTGGC GGCGTGCTGG ACCGGGGTCG CCGTCCCGTG GGGCTGGACA
GAGCATCTCG ATTTCTGGCT GGCCACGCTG GAGGGCTTCT GCCGGCTCCT AGTGTCGCGG
GCTGCGGTCG ATGACGGCCG ACTGATGGCG CCGAAGGGAC CGTGGGGAAG CATGGGGATT
GTTGAGGGCG GGACTCTGGC CTATCTCACG ACGCGGCCGA GTCCTACCGG CGATGCGAAG
ATGCCCAGCT ACGAGATCGG TGCCTGCGGC TACGGCCCGC GGGGCGGCGA GCTGGCGTCC
CGGCTCGCCG AGCGGGTCCG CGACTGGGAC CGTGACGGTG GGCAGGGCGT CCGGCTGTGG
ATCGAGGCAT ATCCGGCTGA CGCCGTCCCT CCGGAGATGC CAGGTGTGCT GCTTGCGGTC
GACAAGCGCG ACAGTCGGGT TCTCGTCCGG GTGGCCGAGC AGGTACCCGC CGCGGTTTGA
|
|---|
| Protein sequence | MQLAEDGRLV VPLRILGLTR TVVFERAGAV LRSRSVVEDG FMPMRALGAV REQNIRVGAG
PDLTIRLDDD RPVDASALRG ALDHPVAACW TGVAVPWGWT EHLDFWLATL EGFCRLLVSR
AAVDDGRLMA PKGPWGSMGI VEGGTLAYLT TRPSPTGDAK MPSYEIGACG YGPRGGELAS
RLAERVRDWD RDGGQGVRLW IEAYPADAVP PEMPGVLLAV DKRDSRVLVR VAEQVPAAV
|
|---|
| |