| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2032 |
|---|
| Symbol | |
|---|
| ID | 3906749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 2389395 |
|---|
| End bp | 2390633 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637879369 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_481135 |
|---|
| Protein GI | 86740735 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.570232 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCT CCGATCCGGA CGCGCTCGCC GCCGCGAACA CTGTTGCCGA AGCACTAGCC
GACCCGCACA CCGCCTGGGC CGCCCACCGA CCGACCGGGG GAAGGGCGTG GCCGCAGTCG
CTCGCCGGCG GCGCGGCGGG CATCGCCCTG CTGCACATCG AACGTGCCCG CTCCGGGTAC
GGCGACTGGA GCACCGTGCA CGCCTGGCTG TCCGCCGCCG CGTCCGACGC CCTGACCGCG
GCGGCCAACG CGGGCCTGTA CCTGGGCGCT CCGGCCCTGG CCTTCACCCT GCACACCGCA
GCCGGACCAT CAGGCCGGTA CCACCGTGCC CTCGCCCATC TGGATCAGGC CGTCGTCGCC
ATGACCCGCA CCCGACTCGC CGCGGCCCAC ACACGCATCG AACAGAGCCG GCGGCCCGCG
ATGAAGGAGT TCGACCTGAT CCGGGGCCTG ACCGGACTCG GCGTCTACCA CCTGCGCCGC
CACCCCGATC ACCCGATCAC CGGCGAACTG CTGTCGTACC TGGTCAGACT GACCGAACCA
CTGGCCGGAA GAGACGACCT CCCACCCTGG TGGACGGACT CTGCACCCAA CGGCGAACCC
AGCCCCGAAT TCCCCCAAGG ACACGGCAAC GTCGGCCTCG CGCACGGCAT CAGCGCCGTC
CTCGCCCTGC TTGCCCTGGC CCACCTGCGC GGCCTGCCGG TCCGTGGCGC CGACGACGCG
ATCGCACGGA TCTGCGCCTG GACCGACCGC TGGTGCCAGC ACGGCGACAC CGGCCCCTGG
TGGCCCGGAT TCATCACCCT CCGCCAGGTC CGTGAAGGCA AGGTCGCCGC AACCCTGCGG
CCCCGCCCCT CCTGGTGTTA CGGCGTCAGC GGCACCGCCC GCGCCCAACA GCTCGCCGGC
ATGGCCCTGC GCGACACCGC ACGCCAGCAA GCCGCCGAGA ACGCGCTCCT CGCGGCACTT
CGCGATGAGG CGCAACTCGA CCAGCTCACC GAGATCGGCC TGTGTCACGG CACCGCCGGG
CTACTCCAGT CCGCCTGGCG CATGGCGGCC GACTCCCACC ATCCCCAGCT CACCGCCGAA
CTCCCCGGCC TGTCAGCCAG GCTGATCGCA CAGATGGGCA CAACCGTGCG CGACCCCGAA
CTTCTCGACG GCGCCGCCGG CGCCGCCCTC GCCCTGCACA CCGCCGGCAC CGGCGCCGCC
CCGACGTCGG GCTGGGACGC CTTCCTCCTG CTGGCCTGA
|
|---|
| Protein sequence | MTSSDPDALA AANTVAEALA DPHTAWAAHR PTGGRAWPQS LAGGAAGIAL LHIERARSGY
GDWSTVHAWL SAAASDALTA AANAGLYLGA PALAFTLHTA AGPSGRYHRA LAHLDQAVVA
MTRTRLAAAH TRIEQSRRPA MKEFDLIRGL TGLGVYHLRR HPDHPITGEL LSYLVRLTEP
LAGRDDLPPW WTDSAPNGEP SPEFPQGHGN VGLAHGISAV LALLALAHLR GLPVRGADDA
IARICAWTDR WCQHGDTGPW WPGFITLRQV REGKVAATLR PRPSWCYGVS GTARAQQLAG
MALRDTARQQ AAENALLAAL RDEAQLDQLT EIGLCHGTAG LLQSAWRMAA DSHHPQLTAE
LPGLSARLIA QMGTTVRDPE LLDGAAGAAL ALHTAGTGAA PTSGWDAFLL LA
|
|---|
| |