Gene Francci3_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1964 
Symbol 
ID3903672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2305621 
End bp2306157 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content67% 
IMG OID637879301 
Producthypothetical protein 
Protein accessionYP_481068 
Protein GI86740668 
COG category[S] Function unknown 
COG ID[COG4420] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCT CCGCCGACAC CCATGGCCGA CCCCGTCACG CCGAAGCGGG TGGCCGCCCG 
CATCCGCGTA TTTCCAACGA GCGGATCGCC TTCGCCCGGA TGCGCACCTC GCAGGACCGC
GGGGCGGATC TGATCACCTC CTTCGCGGGA TCGCTGCCCT TCGTCTACCT GCATGCGGTC
TGGTTCGGCG GCTGGATCCT GTTGAACGAG GGCGTGTTCG GCGAGGGCGC CGTCTTCGAC
CGCTACCCGT TCGGCCTCCT GACGATGATC GTCAGCTTGG AGGCGATCTT CCTATCGACG
TTCGTGATGG TCAGCCAGAA CCGTGAGGCC GCCCGGCAGA ACCTCCGTGC CGAACTCGAC
TTCGAGACCA ACCTGCGGTC CGAGGTGTGG TCGGTCCACA TCGGGCGGGC GCTCGGGCTT
GACCCCGACG AGGTGGAACG GGACGTCCAG GAGCTCGTCG CGCACGCCCG CGCGGAGATC
CGTAACGGCC AGGCCCAGCC GATGGGTCCG GGAGTGATGG ATCCGGGAGT GTCGTGA
 
Protein sequence
MSSSADTHGR PRHAEAGGRP HPRISNERIA FARMRTSQDR GADLITSFAG SLPFVYLHAV 
WFGGWILLNE GVFGEGAVFD RYPFGLLTMI VSLEAIFLST FVMVSQNREA ARQNLRAELD
FETNLRSEVW SVHIGRALGL DPDEVERDVQ ELVAHARAEI RNGQAQPMGP GVMDPGVS