Gene Francci3_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1944 
Symbol 
ID3904306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2283857 
End bp2284540 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content76% 
IMG OID637879281 
Producthypothetical protein 
Protein accessionYP_481048 
Protein GI86740648 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCC CGATGTCCCC GACGGCCGAC GGCGCGTTGC GGCGGCTTGT GCGCGCCGCG 
ACCGACCGCG CCGGCGCGGC CGAGGCCCGC TGCGACATGT GCCGGACCGC CGTGCCGGCG
GAGCATCGGC ACATCCTCGA CGAACAACGC GACGAGCTGC TCTGCGCCTG CCAGGCGTGC
GCGCTGCTGT TCGACCGGGA GGCGGCCGGA CGTGGGCACT TCCGGCTCGT TCCCCGGCGA
CGGCTGCGGC TTCCCGCACT CGACGCGGAC GAGCTGGGTA CCCCGGTGGG GTTGGCGTTC
TTCGTCGTCG GGACCGACGG CTCGGTCAGC GCCCGCTATC CCAGCCCGAT GGGCGCCACC
CGCTGGGGCG TCGCGCCCGG CACGTGGCGC GGCATCGTGC GGCGCTGCCC GGCGCTGGGT
GACCTGACAC CGCTGGTCGA GGCGCTGCTG ACGAACACTA CCCACGGCCG CCACGAGCAC
TGGATCGTTC CCGTCGACGA CTGTCACCGG CTCGTGGCGG TCATCCGGCG GGAGTGGAGG
GGCCTGTCCG GAGGCCTGCG CGTGTGGCCG GCGATCGACG GGTTCTTCGC CGATCTCGGC
CGCCGGCCCG CAAGCCCGGT GCGGGCCGCA CGGCCGGTGC ATCTCACGGG CCAGGGCCGC
GCTGGCCCCG CGGGGCGGGG CTGA
 
Protein sequence
MTAPMSPTAD GALRRLVRAA TDRAGAAEAR CDMCRTAVPA EHRHILDEQR DELLCACQAC 
ALLFDREAAG RGHFRLVPRR RLRLPALDAD ELGTPVGLAF FVVGTDGSVS ARYPSPMGAT
RWGVAPGTWR GIVRRCPALG DLTPLVEALL TNTTHGRHEH WIVPVDDCHR LVAVIRREWR
GLSGGLRVWP AIDGFFADLG RRPASPVRAA RPVHLTGQGR AGPAGRG