Gene Francci3_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1943 
Symbol 
ID3904305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2283285 
End bp2283860 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content74% 
IMG OID637879280 
Productnitrogen-fixing NifU-like 
Protein accessionYP_481047 
Protein GI86740647 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGATC CGGACGGCGC GGGTGGGCAC CGGCTCGACG ATCTCGCTGT GCGGGGCCGG 
CTCGCCCACC TCGACGAGGT GCTGGCGCAG GTGGAGCGCA TTCCGGGGCC GAGTGGTGAG
CTGGCGATCG ACGCGGTGGC AACACTCGCG GCGGTGTACG GCGAGGCGCT GGCCCGAGCC
GTCGGATACG CGTCGGGAGC CCCGGAGGTG CTCGCCGCGT TCACCGGCGA CGAGCTGCTC
GACCATCTGC TCGTCCTGCA CGACGTCCAT CCTGAGCCGG TCGGGGCCCG GGTCGCGCGG
GCGATCGAGC AGCTTCGACC CGCAGTCCGG GACCGGGGTG GGGAGATCGA GCTGAGTGGG
ATCGAACGGG GGGTGGCCGA GGTCCGGCTG ACCCTCGGCG GGTGTGGCTC GACCTCGGCG
GGGGTCACCG AGGCGGTTCG CCAGGCCGTG CTCGCCGTCG CGCCGGAGCT GTCCGACGTC
CGGCGCCTAC CCGCGCCGGG TGAACCCGAG CGGACCGCCT TCGTTCCCCT CGACACCGTG
CTCGCCCGGC CCGTCGCCGA CGGGGTGGGT CCATGA
 
Protein sequence
MVDPDGAGGH RLDDLAVRGR LAHLDEVLAQ VERIPGPSGE LAIDAVATLA AVYGEALARA 
VGYASGAPEV LAAFTGDELL DHLLVLHDVH PEPVGARVAR AIEQLRPAVR DRGGEIELSG
IERGVAEVRL TLGGCGSTSA GVTEAVRQAV LAVAPELSDV RRLPAPGEPE RTAFVPLDTV
LARPVADGVG P