Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1928 |
Symbol | |
ID | 3904290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2265644 |
End bp | 2266324 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637879265 |
Product | hypothetical protein |
Protein accession | YP_481032 |
Protein GI | 86740632 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.516207 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAGCC ACCTGATGAC GCCGAGCCCT GACGGCCCGC GGGAAGCCGA CGATCCGGAG GACTACCTGA GCGTGCCGTG GTCCGTGCTC GCGGACTATC GGTGTTTCGG CTGCTCGCCG CACAATCCGC ACGGGCTGCA ACTACGCTTC TCCGCCCACG CCGACGGCAT CTCGACCCGT TTCCGGCTCG AACGCCGGCA CGAGTCCTAT CCCGGCGTCG TGCACGGTGG CCTCATCGGA GTGATCGTCG ATGAGACGAT GGGCAATCTG ATCGTGCTGC AGGTCGGGCT CACCGCGTTC ACCACCGCGC TGCGGGTACG CTACCTCGCC CCGCTGAGCG TCGGCGCCGA ATACCGCTGC GTCGCCCGGC TGCGCGGCGT CCCGGATGCT ACCCCCGGCC GCGGGGACGC GGCACCGGTC GGCGGCACGG CCGGCGGCGT AAGCGGCGGC AGAGCAAACG GGCTGGTGCA CGCCGAGGCC GAGCTCCTCG ACGAGGCCGG GACGCTGCTC GCGACCGCAA GCGCGACCTA CCGCCCGACC CCGATGGACA CCGCCCGGGA CCGGATGATG CTGAATCCGA CCGAGGCCGA CCGCGTCGCG CAGGCGCTGG CGGCGACGCT CACCAGACCA CCGGCCACCG GGTCCACCGC CGCCGGCCTC CCCACCTCAG AGGAGCACTG A
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Protein sequence | MHSHLMTPSP DGPREADDPE DYLSVPWSVL ADYRCFGCSP HNPHGLQLRF SAHADGISTR FRLERRHESY PGVVHGGLIG VIVDETMGNL IVLQVGLTAF TTALRVRYLA PLSVGAEYRC VARLRGVPDA TPGRGDAAPV GGTAGGVSGG RANGLVHAEA ELLDEAGTLL ATASATYRPT PMDTARDRMM LNPTEADRVA QALAATLTRP PATGSTAAGL PTSEEH
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