Gene Francci3_1928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1928 
Symbol 
ID3904290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2265644 
End bp2266324 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content72% 
IMG OID637879265 
Producthypothetical protein 
Protein accessionYP_481032 
Protein GI86740632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.516207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGCC ACCTGATGAC GCCGAGCCCT GACGGCCCGC GGGAAGCCGA CGATCCGGAG 
GACTACCTGA GCGTGCCGTG GTCCGTGCTC GCGGACTATC GGTGTTTCGG CTGCTCGCCG
CACAATCCGC ACGGGCTGCA ACTACGCTTC TCCGCCCACG CCGACGGCAT CTCGACCCGT
TTCCGGCTCG AACGCCGGCA CGAGTCCTAT CCCGGCGTCG TGCACGGTGG CCTCATCGGA
GTGATCGTCG ATGAGACGAT GGGCAATCTG ATCGTGCTGC AGGTCGGGCT CACCGCGTTC
ACCACCGCGC TGCGGGTACG CTACCTCGCC CCGCTGAGCG TCGGCGCCGA ATACCGCTGC
GTCGCCCGGC TGCGCGGCGT CCCGGATGCT ACCCCCGGCC GCGGGGACGC GGCACCGGTC
GGCGGCACGG CCGGCGGCGT AAGCGGCGGC AGAGCAAACG GGCTGGTGCA CGCCGAGGCC
GAGCTCCTCG ACGAGGCCGG GACGCTGCTC GCGACCGCAA GCGCGACCTA CCGCCCGACC
CCGATGGACA CCGCCCGGGA CCGGATGATG CTGAATCCGA CCGAGGCCGA CCGCGTCGCG
CAGGCGCTGG CGGCGACGCT CACCAGACCA CCGGCCACCG GGTCCACCGC CGCCGGCCTC
CCCACCTCAG AGGAGCACTG A
 
Protein sequence
MHSHLMTPSP DGPREADDPE DYLSVPWSVL ADYRCFGCSP HNPHGLQLRF SAHADGISTR 
FRLERRHESY PGVVHGGLIG VIVDETMGNL IVLQVGLTAF TTALRVRYLA PLSVGAEYRC
VARLRGVPDA TPGRGDAAPV GGTAGGVSGG RANGLVHAEA ELLDEAGTLL ATASATYRPT
PMDTARDRMM LNPTEADRVA QALAATLTRP PATGSTAAGL PTSEEH