Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1910 |
Symbol | |
ID | 3906859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2242800 |
End bp | 2243693 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637879248 |
Product | urate oxidase |
Protein accession | YP_481015 |
Protein GI | 86740615 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3648] Uricase (urate oxidase) |
TIGRFAM ID | [TIGR03383] urate oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.481639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATCG TTCTCGGGCC CAATCAGTAT GGAAAGGCGG AGGTCCGTCT CGTCCACGTG GCGCGGAACG GACCGGTGCA CCAGATCACC GATCTGAACG TCTCCACCGC GCTTCGTGGT GACTTCGCCG CCGCGCACCT GTCCGGCGAC AATGCGCACG TGCTCACCAC GGACGCGCAG AAAAACACCG TCTACGCCTT CGCCCGCGAG CACGGAATCG GCCAGATCGA GGATTTCGCG ATCCGGCTGG GTCACCATTT CGCCGGATCC CTCCCGGGGA TCGACGGCGC CCGGATAGAA ATCGAGCAGT ACCGGTGGGA CCGCATCCAG GTGGATGGGG TGCCGCACGA CCATGCCTTC AGCAGGTCGG CTGGGGAGAA AAGGACGACG GTCGTCACCC TCGACCGTGG CACGGCCTTC GTCGTGTCCG GACTCGCCGG GCTGGTCCTG CTGAAGTCGA CCGGCTCGGA ATTCTCGGGG TTTCTCCGCG ACCGGTACAC CACACTGCCC GAGACGACAG ACCGCATCCT GGCGACAGAG GTCACCGCCC GCTGGCGCTA CGCCCAGTCA GACCTCGACT TCGGGCGGCT GTTCGACGGG GTACGGACGG CTCTGGTCAG CACCTTCGCG AGCCTCCACA GCCTGGCTCT GCAACAGACC CTGTACCGGA TGGGCGAGGC GGCGCTGACC GCGCACGCCG ACGTCGCCGA AATCCGCCTG TCAATGCCGA ACAAACACCA CTTTCTGGTT GATCTAGAAC CGTTCGGGCT CGATAATCCC AACACGGTCT ACTACGCTGC GGACCGGCCG TACGGCAAGA TCGAGGGAAC GGTCCTGCGC GATGACGCTC CCGACCCGGG GCCGAGCTGG CTGACCCTCC CGGGATTCTG CTGA
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Protein sequence | MAIVLGPNQY GKAEVRLVHV ARNGPVHQIT DLNVSTALRG DFAAAHLSGD NAHVLTTDAQ KNTVYAFARE HGIGQIEDFA IRLGHHFAGS LPGIDGARIE IEQYRWDRIQ VDGVPHDHAF SRSAGEKRTT VVTLDRGTAF VVSGLAGLVL LKSTGSEFSG FLRDRYTTLP ETTDRILATE VTARWRYAQS DLDFGRLFDG VRTALVSTFA SLHSLALQQT LYRMGEAALT AHADVAEIRL SMPNKHHFLV DLEPFGLDNP NTVYYAADRP YGKIEGTVLR DDAPDPGPSW LTLPGFC
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