| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1874 |
|---|
| Symbol | |
|---|
| ID | 3906149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 2209104 |
|---|
| End bp | 2209793 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637879212 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_480979 |
|---|
| Protein GI | 86740579 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.360142 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGCCA CCGAGATCGT CCAGGCCAGC CTCGCTGAGC GTGGCCTCAC CCCGGGCGAG
CACTACCTCG ACGCCGGCTA CTCCAGCGCC GACCTCATCC ACGACGCCGC CACCCGGGGC
ATCACCATGG TCACCCCAGC CCTCCTCGAC CACTCACCCC AGGCCAAGGC CAACGCCGGG
TTCGACAAGG CCGCGTTCCG GATCGACTGG AAAGCCCGCC AGGTCCGCTG CCCGCAGGGC
CACACCAGCA CCGCCTGGTA CCCCGTCCGC CAGCACGAAC GCGACGCCAT CGTCGTCGCG
TTCGCCCGCA CCGACTGCCA CCCCTGCCCC ACCCAGAAAG CGTGCACCAC CTCCACCCGC
CGCACCCGTT ACCTCAGCCT GCGCCCCCGA GAACTCCACG AAACCCTGGC CACCGCCCGC
GCCGAGCAGG CCACCGACAC CTGGAAGACC AGGTACGCCC TGCGCGCTGG GATCGAGGGC
ACGATCAACC AGGCCCTCGA CGTCACCGGC CTGCGCAACG CCCGCTACCG CGGCCTGCCC
AAGACCCGCC TCCAACACGC CTTCTCCGCC ACCGCGGTCA ACGTCCTCCG CCTCGACGCC
CACTGGAACC CCGACCAGCC ACCCTTCACA CCCCGCGCCA GCAGGCTCAC CCGCCTCAGC
CAGCAGCGCA CAACCCCAAC CGCGAATTAA
|
|---|
| Protein sequence | MKATEIVQAS LAERGLTPGE HYLDAGYSSA DLIHDAATRG ITMVTPALLD HSPQAKANAG
FDKAAFRIDW KARQVRCPQG HTSTAWYPVR QHERDAIVVA FARTDCHPCP TQKACTTSTR
RTRYLSLRPR ELHETLATAR AEQATDTWKT RYALRAGIEG TINQALDVTG LRNARYRGLP
KTRLQHAFSA TAVNVLRLDA HWNPDQPPFT PRASRLTRLS QQRTTPTAN
|
|---|
| |