Gene Francci3_1839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1839 
Symbol 
ID3906230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2175330 
End bp2176007 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content67% 
IMG OID637879177 
Producthypothetical protein 
Protein accessionYP_480944 
Protein GI86740544 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.594206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCAAC GTGGCCTATC TCGATCTTCG CAGGTCGGCG GTCTCGGGCG GCTAGGCCGC 
CGCGCCTCGT CGCGGAGTCT CAGGACACGG GCATGCCGGT GGGCGCGCCG CACCGCGCGG
GATGCGTCCC TCGCGCGGGA GCGTTTCGCG CCAATCGGTG TGAAGAGGAT GCGGCTCACC
GACGGTCTCG GTGCAGGTCA GGCAGGGCGC GCGACCCCGA ATCACCTCTT CGCTCCTCGG
GGAATGACTC GCGCCCGGCT CCTTGAAACG CTAGCCCGCG TTCCGCCAGC CATCGAGCCG
TGCCAGCGCT GGCACCCGAC CGAGCCCACG ACGATCAGCC CACTACCGAC GCCATGGTCG
GCTGCCACGC GGCCATCGAC AGCGAGGCGT GACACAACGC AACGCTCGCA ACAGCGCCAG
TCCTTTGCTT CCAAATCCAT CACCGTCACG AGCGTTATCA ACCAGCCCGT CCAATCCGGC
GACCACAACC GGGGGCGGAC CCGGAAGGGA GTCCGAGTGT CCGACAGCAC CTCCAGCTAC
GAGGGTTACT GCCTCAAATG CAAGGAGAAA CGCCACTACA CCGGCGAGGT CCGGATCAGC
GAGTCCCGCC GGCGGATGGC CCGAGGCTCA TGCCCTGTCT GCGGCTCGAC GATCAACCGC
ATCCTCGGCA AAGCGTGA
 
Protein sequence
MHQRGLSRSS QVGGLGRLGR RASSRSLRTR ACRWARRTAR DASLARERFA PIGVKRMRLT 
DGLGAGQAGR ATPNHLFAPR GMTRARLLET LARVPPAIEP CQRWHPTEPT TISPLPTPWS
AATRPSTARR DTTQRSQQRQ SFASKSITVT SVINQPVQSG DHNRGRTRKG VRVSDSTSSY
EGYCLKCKEK RHYTGEVRIS ESRRRMARGS CPVCGSTINR ILGKA