Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1822 |
Symbol | |
ID | 3906213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 2159649 |
End bp | 2160875 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637879160 |
Product | hypothetical protein |
Protein accession | YP_480927 |
Protein GI | 86740527 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.961315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCCAG GCACCGCGGA AGACACCGGC CGCGACACGC TCTCCAGCCG GGCACTGGCC GCCTCAGCGG CAATCGCGGA CCAGCTCGCC GACCCCGCCG CCGTTCCCCG AGGCCCTGGC CGGCGGCGAG GCCAGTCCCT CGCGGGCGGT GCAGCCGGCA TCGCGCTGCT CCACCTCGAA CGAGCCCGCA CCGGCCACGG CGACCCCGCC ATCGCCAACG CCTGGCTACG GGCGGCAACC CGAGACCCAG CCAGCGCAGG GCCCAACGCC TCCCTCTACT TCGGCGCCCC CACCCTCGCC TTCGTACTCG ACGCCGCAGG CCGCCCAGAC CAGCTCACCC AAGCGGTCAC CACACTCGAC ACCGCGACCA TCGCGGTCAC ACAGCGACGA CTTGCCGCGG CTGACGCCCG CCTCCGCGCG GGCCTCCGCC CGCCGCTCGC CGAATTCGAC CTCATCCGCG GCCTCGCCGG CCTCGGCCGC TACCACCTAC GCCGCCAGCA CCCGATCATC ACCGATGTCC TGACCCACCT CGTCCGTCTC ACTCAGCCCC CTGCCAGCGG AGACGGACTA CCCGGGTGGT GGACCGACCT CGACCCCAGC GGCGCATCCT CCCGTGACTA CCCACACGGT CATGGAAATG CCGGAATGTC CCACGGCATC GCCGCCTGCC TCGCCCTGCT CGCACTAGCC AACAGCCGCG GCACCGAGGT CGACGGCCAC CGGGAAGCGA TCGAACGGAT CTGCGCCTGG CTCGACGGGC ACCAGCAGCC TGGCATCGCT GGCTGGCCGG GCATCGTCAC CCCGACACCG GGCCATGACG TCAGGCAGCA GCGGTTGTCC TGGTGCTACG GCACCCCAGG GATTGCCCGT GCGTACCAAC TCGCTGGACT CGCCACCAGT GACCCGAGGC GCTGCGAGAA GGCCGAAACC GCGTTGCACG CATGTCTCGA CGACGCGGCT CGCCTCGAAC TGACCACCGA CATCGGCTTG TGCCACGGCC TGGCAGGGCT GGTCCACACG ACATCCCGGG TCGCGGCCGA CGCCACCACA CCCGAACTCG CCCAGCTCCT GCCCACCCTC GTCGCCCGGC TGCTCGACCA ATACCCCACC GCGCCGCACG ACCCGGAGCT TCTCGATGGC TTGGCCGGGG TGGCGCTTGC CCTGCACACC GCGGCCCTCG GCTCCGCCCC CGTGACCGGG TGGGACGCCG CCTTGCTCCT CGCGTGA
|
Protein sequence | MNPGTAEDTG RDTLSSRALA ASAAIADQLA DPAAVPRGPG RRRGQSLAGG AAGIALLHLE RARTGHGDPA IANAWLRAAT RDPASAGPNA SLYFGAPTLA FVLDAAGRPD QLTQAVTTLD TATIAVTQRR LAAADARLRA GLRPPLAEFD LIRGLAGLGR YHLRRQHPII TDVLTHLVRL TQPPASGDGL PGWWTDLDPS GASSRDYPHG HGNAGMSHGI AACLALLALA NSRGTEVDGH REAIERICAW LDGHQQPGIA GWPGIVTPTP GHDVRQQRLS WCYGTPGIAR AYQLAGLATS DPRRCEKAET ALHACLDDAA RLELTTDIGL CHGLAGLVHT TSRVAADATT PELAQLLPTL VARLLDQYPT APHDPELLDG LAGVALALHT AALGSAPVTG WDAALLLA
|
| |