Gene Francci3_1760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1760 
Symbol 
ID3906826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2090890 
End bp2092215 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content67% 
IMG OID637879098 
Producthypothetical protein 
Protein accessionYP_480865 
Protein GI86740465 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.50844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.257048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGCG ACCATGCCAC GGCCAGGGGC GTCGTGGAGT CGGGCGCGGC AGGGCTCGCC 
GCGCGGCTGC ACCAGTTGCG CGCCGCTCGG GGCCCTGCGC CGCCGCGATT TACTGAGCGG
GTGAGCGAGC TTATTATGAT TGCCTCGGGC TCCCGTGGTG GGTCCAGCAT GCTCGCCGAG
TTACTGCGGC TGAGTCCGCA CGCCCTGCAC TTCCGCGCGG AGATCAACCC GTTCCTTCGC
CTGGCTGGAT TGGGTCATCC CAACAGCGGC ACCGGTTCCG ACCGACTAGA TGCCGCGCAC
CTGTACGCTC TGAACCCGGC TGTGCGTCTG GCGCTGGAGC ACGACCTAGC CTTGGACGTG
GGCACCCCTG CTGCGCAGGT CGATGAGGAG GCAGTGGACC GATTCGCCCT CGACGTCGCC
TGGCGGCTGT CGGTGCAGTG GCCTGAGATG GACATTGATC CGTTCATGCT GGCCGACGCG
GCCTGCGCGG TGCTCCCCCG GAGTGGAGCA GGGGACTGGA ACACCGAGCG ATTCCATCGC
CGTCTGCTGG CGGAGTTGGC CAGCCGCGGT ATTTACATGG AAGAGGGGTT TTACGACATG
CCCACTTCCC AGCCGCCGAT GCGGCCCCCC GGGCGTATCC TGGTCGAGGA ACCGCCGTTC
GTGCTGACCC AGCCGTGGCG GCCCGCCGAC CCGCATGCGT TGGAGACCAT GCCGCTGATT
GTCAAGACCC CTAGTAACGT GCACCGGTTC GACTTCCTGC GTGCCCTGTT CCCCAACGCT
CGGCTTCGTG TGCTGCACCT GACCCGCAAT CCCGCCGCCT CGGTCAACGG TCTCATCGAT
GGCTGGCGTC ACCACGGCTT TCACTCCTAT CGGCTGCCCG TACCGCTACG CATCGCCGGT
TACGTCGATT ATCGTCCCGC TGACCGGCAC TGGTGGAAGT TCGACCTGCC GCCGGGCTGG
GCGGACCACA TCGCCGAGCC TCTGGCCCGA GTATGCGCTT TCCAATGGCG TTCCAGCCAC
GAGGCAATCA TGGCGGAGCT GGACCGCAGC GCCATCGACT GCCTGCGCGT GCGTTTCGAG
GACCTGACGC GGGACGCGGA CTCCAGGGTA ACCGAGCTGC GGCGCATCTC CAGCTGGTTG
GGAATCCCAT TCGAGGGATC GTTAGGCAGG GCCGCCTACT CGGGCATTGA CCCGGTGGTG
GCCACCCGGG CGCCTCGCCC GCGGCGGTGG CTGGACCGAG CAGGGGAGGT GCGGCCGGTG
CTGGGAGGTG AGGTGGCAGA GACGGCAAGG AGACTAGGCT ATGACAGCCC AGACACCTGG
ATCTGA
 
Protein sequence
MASDHATARG VVESGAAGLA ARLHQLRAAR GPAPPRFTER VSELIMIASG SRGGSSMLAE 
LLRLSPHALH FRAEINPFLR LAGLGHPNSG TGSDRLDAAH LYALNPAVRL ALEHDLALDV
GTPAAQVDEE AVDRFALDVA WRLSVQWPEM DIDPFMLADA ACAVLPRSGA GDWNTERFHR
RLLAELASRG IYMEEGFYDM PTSQPPMRPP GRILVEEPPF VLTQPWRPAD PHALETMPLI
VKTPSNVHRF DFLRALFPNA RLRVLHLTRN PAASVNGLID GWRHHGFHSY RLPVPLRIAG
YVDYRPADRH WWKFDLPPGW ADHIAEPLAR VCAFQWRSSH EAIMAELDRS AIDCLRVRFE
DLTRDADSRV TELRRISSWL GIPFEGSLGR AAYSGIDPVV ATRAPRPRRW LDRAGEVRPV
LGGEVAETAR RLGYDSPDTW I