Gene Francci3_1754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1754 
Symbol 
ID3906820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2085472 
End bp2086419 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content73% 
IMG OID637879092 
ProductPfkB 
Protein accessionYP_480859 
Protein GI86740459 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.565362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACT CGGCGAGGCT ACTCGCCCCG CTCGGACCAG GGCGTGCGGC CCGACCCGAG 
CGGGTCGGTG TTCTCGGCTC CATGGTGCTC GACCGGCGCT GGTCCCGGTC AGGCTCGATG
TCCGGCCTGC CGGTATGGAC TGTCCTCAGT GGTCACGGTG GGATCGCCCG CAACGTGGCG
GAGAACCTGG CCAGGCTCGG CGCGGAGGCC GGATTTGTCG GGTTGGGCGA GCCGGGGCCG
GTAGGCGCGG CCTTCGAGCG GCGACTGACC GGGTTGGGCG CGGCGGTGCT GACCGCGCCG
GTGGCTCGGA GCATCGGCCA GTTCGACTGC GAGATCTCCA CCGAAGGCGA CCCGGTGTGG
GCAGGTATCC ACCTGCCCGC GGCCGACGAA CTCTCATGGC CAGTGGTGGC GGCCGCGACC
GGCTGGCTCC GCGGCGCGCG CGCCGTCCTA GTGGAGACCG GGTCGCCGCT GGCGACTCTG
ACTCGGCTGC GGGTGTGGGC CAACCGGCGA GGTGTCCCGC TGTGGGGGCT ACCGACCGAC
ATCGCGGCCT CGGGCCCGCG CTGGGAGCTG TTTCGCTCTC TGGCCCTCAT GGTACTCAAC
CAGTTCGAGG CTGCCGAGCT GCTCGGTGGC GGCACGGGCG ACCCGGTGAC TGACGCGCTG
GCTCTGACAG CCCGCGGGCT GCCCGCTGTG GTGGTAACGA CCGGGGCGCG CGGTGCCGTG
TGCGCGGCGG CGGACGGTTC CTGGTCGACC TACCCGGCGC GCCAAGTCTC CTGCGTTGAC
GCTACCGGTG CAGGCGACGC GTTCGTCGCC GGCCTGGCCG TTGCCCTGGC CCGGGGCGAG
CCGTGGATCG CCGCGGTGGA CCACGCGATG GCGGCGGCCG CGGTAATCGT CGGTTGCGGC
CGCTCGACCT GCGCGCGTCT GTCGCGGCTG GATAAGGACC CGATATGA
 
Protein sequence
MLDSARLLAP LGPGRAARPE RVGVLGSMVL DRRWSRSGSM SGLPVWTVLS GHGGIARNVA 
ENLARLGAEA GFVGLGEPGP VGAAFERRLT GLGAAVLTAP VARSIGQFDC EISTEGDPVW
AGIHLPAADE LSWPVVAAAT GWLRGARAVL VETGSPLATL TRLRVWANRR GVPLWGLPTD
IAASGPRWEL FRSLALMVLN QFEAAELLGG GTGDPVTDAL ALTARGLPAV VVTTGARGAV
CAAADGSWST YPARQVSCVD ATGAGDAFVA GLAVALARGE PWIAAVDHAM AAAAVIVGCG
RSTCARLSRL DKDPI