Gene Francci3_1687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1687 
Symbol 
ID3903074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2023965 
End bp2024780 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content79% 
IMG OID637879025 
Producthypothetical protein 
Protein accessionYP_480792 
Protein GI86740392 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00398874 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.697204 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGAGCG ACGCCGAACG CTGGCGCCGG GGACGGGCGG CGACGGTCTG GCCGACGGGC 
CTGCTCGCCC TCGCCGGCCA GGACGGTGCC GGCGACGGCC CGCGTGGCGG CGCCGCGGCG
GACATGGCGG TTCCCGCGGC GGTCGCTGCC CATGCCATCG CCCTCTACAG CTGGCCCGGC
GACACCGTCT GCGACCCGGA CTGCGCCGAC GGGGCCGTTC TCGTCGAGGC GGTTCTGGCT
CGACGGCACG CCGTCGGCAT CGCAGCGGAC CGGCGCGCCT GGCAGACCGC TCGCCACGCC
CTGACCGCGG CCAAGGCGCG GGGCGCGCCC GGTGACGGGA CGATTCTGGA CCGCTTGCCC
GACGGGTGGT CCTGGACCGG ACTCGGACCG GTCGACCTGC TTCTGACCGC CCTCGGACCG
CCCGCCGACT CGGCCGGCCC GCATGGTCTG AGGGGCGACC GGCTGGCGAC CCGCCTCGCC
GGCTACCGGG ACCTGGCCCG GCCCGCGGGC CGCCTCGTGG TCGTGGCCGC CTACCACGTC
GCCGATGGCC TCGATCTGGC CAGCCGGATC GTCGCCGCCG GCCGCAAGGC AGGCTGGCAG
CCCGTGCAAC GCGCGGTCGC GCTCACCGCC GTCCCCTACA CCCGTGCGCT CGACGCCGCG
CCCGCGACCG GCCGTGCCTG GCCTGCCCAC CACGACGTGC TCCTCTTCCG GTCCCGCGGG
CAGCCGGCGC GGCCCCCGCG CCCACCGGAG CTGCCGCCGT CCAGCCCGGC GCCCGCCGCC
GACCCGCCCG CCGCCGCGGC GAACCGCGCC GCCTAA
 
Protein sequence
MRSDAERWRR GRAATVWPTG LLALAGQDGA GDGPRGGAAA DMAVPAAVAA HAIALYSWPG 
DTVCDPDCAD GAVLVEAVLA RRHAVGIAAD RRAWQTARHA LTAAKARGAP GDGTILDRLP
DGWSWTGLGP VDLLLTALGP PADSAGPHGL RGDRLATRLA GYRDLARPAG RLVVVAAYHV
ADGLDLASRI VAAGRKAGWQ PVQRAVALTA VPYTRALDAA PATGRAWPAH HDVLLFRSRG
QPARPPRPPE LPPSSPAPAA DPPAAAANRA A