| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1680 |
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| Symbol | |
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| ID | 3903067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2017552 |
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| End bp | 2018241 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637879018 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_480785 |
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| Protein GI | 86740385 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.128873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.734397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTAG CGAACGGAAC CACAGTACCC GCAGTACCTG GCGCCATCAC CGTGGCGGCA
GTGGACGATC ACCCGATCGT GCTTCGCGGC CTCGCGGACC TCCTTCACGA CGTCGAGGAC
TTCAGGCTGA TCGGCACCGC CCACTCCATC GAAGCCCTGC TGGCCGGTCC GGGGCGCGGC
GCCCAGGTGA TCCTGCTCGA TCTCGATCTC GGCGATGGCA CCGCGCCGCC CCATAACATC
CAGCGGCTGC TCGCGGTGGA CCGCGCGGTC GTGGTTTTCA GCGCCGCGGC GGCTCCCGCG
ACGGTTCGCG ACGCGATGCG CGCCGGCGCG TCGGGCTTCG TCCCGAAGAC CGACGACATC
GAGGATCTGG CCACCGCGAT CCGCGCCGCC GCCGCGGGAA CGGGGTGGAT CTCGCCGCAG
CTGGCATTCC TGCTGCTCAC CGATGACGCT ACGGACAAAC CGGATCTGTC GCCCAAAGAG
GTAGAAGCAC TGCGTCTCTA TGCGACCGGA ATGCCCATGA AGACGGTTGC CCACAAGATG
AACGTCTCCC CGGAAACGGC GAAGCAGTAC ATCGATCGGG TCCGGTCGAA GTACCGCAAG
GCCGGGCGGG ACGCGAGCAC CAAGGTCGAC CTCTACAAAC TCGCGGTGGA AGACGGTCAT
CTCAACCCCG GTGCCGAGGG AACGGCCTGA
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| Protein sequence | MSVANGTTVP AVPGAITVAA VDDHPIVLRG LADLLHDVED FRLIGTAHSI EALLAGPGRG
AQVILLDLDL GDGTAPPHNI QRLLAVDRAV VVFSAAAAPA TVRDAMRAGA SGFVPKTDDI
EDLATAIRAA AAGTGWISPQ LAFLLLTDDA TDKPDLSPKE VEALRLYATG MPMKTVAHKM
NVSPETAKQY IDRVRSKYRK AGRDASTKVD LYKLAVEDGH LNPGAEGTA
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