| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1620 |
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| Symbol | |
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| ID | 3905899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1943946 |
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| End bp | 1945151 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637878958 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_480725 |
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| Protein GI | 86740325 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.368561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.738285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGTC CTGGACGGCG AGGGGGCGTG CCCCGACCGA GCGTGACGCG GTGGGGGGCC
CTCGGATCCG TGGGTGTGCT GACAGCCGCG GCCGTCCTTG CCGGCTGCGG CGGTGGTTCG
TCCGGTGACG ACGGGAAAAA GGAATACGCC ATCGGTTTTC AGGGGCCGCT CTCCGGCGAC
AACCAGCAGC TCGGCATCAA CGCCTACGAC GGGGTGCTGA CCGCTGTCGA GCTAGCGAAC
CGGCGCAAGG ATCTGCCGTT CAGGCTGCGC CTGGTCGCCT CGGACGATCA GGGTATGGCC
GAGCAGGGGC CCACCGCCGC GCAGAAACTG ATCGACAATC CGGAGGTCAT CGGCGTCGTC
GGCCCCGTCT TCTCCGGACC GACGAAGTCG AGTGAGCCGC TCTACAGCGG GGCCGGGCTG
CTGTCGGTCA GCCCGTCGGC CACCAATCCG GCGCTCACCG ATCTCGGGTT CACCAGCTTC
TACCGGGTCA TCGCACCGGA CACCGTGCAG GGATCCGCCG CCGCGGAATA CCTTGCCAAG
GTCGTGAAGG CGGACAAGGT CTACTCTCTC GACGACCGGA GCGAATACGG CACCGGCTTG
TCCGGAGCGC TCGAGAAGGC CCTGACCGGC CGTGGCATCC GCGTGATCCA CGACGGCATC
AATCCGACGA AGGACTACAC GTCCCAGGCC ACGAAGATCC TCGCCGAGAA TCCGGACGCC
GTGTACTATT CTGGCTACTA TGCGGAACTC GCGTTGCTGA CCAGGGCGCT GCGCAGCAAG
GGGTACACCG GGAAGGTCGT CAGCGGCGAC GGCGCGAACG ACGACCAACT CATCCACCAG
GCCGGTGCCG GCAACGCCGA GGGAACGCTG CTGACCTGCC CCTGCGGTGA CCCGAACAGC
GATCCCGCGG CGGCGGGGTT CGTCGCCGAC TACAAGACGA TCAACGCCGA CGCGCGGCCT
GGAACCTATT CCGGCGAGGC TTATGACGCC ACGAACGCCG TCATCGAGGT GCTGCGCCGG
CTCGGTAGCG GCGCGACGCG GGAGGCCGTG CTCGCCCGGT TCGGCTCGGT CGACATTCCT
GGCGTCACCA AGCGCATCAG ATTCCGGAAG AATGGTGAGG TCGAGGGCTC GACGGTCTAC
GTGTACGAGG TCCGGGCCGG GAAACGGGCC GTGCTCGGCC CGGTCAGCTC CCTCGTCAGA
CCGTAA
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| Protein sequence | MTGPGRRGGV PRPSVTRWGA LGSVGVLTAA AVLAGCGGGS SGDDGKKEYA IGFQGPLSGD
NQQLGINAYD GVLTAVELAN RRKDLPFRLR LVASDDQGMA EQGPTAAQKL IDNPEVIGVV
GPVFSGPTKS SEPLYSGAGL LSVSPSATNP ALTDLGFTSF YRVIAPDTVQ GSAAAEYLAK
VVKADKVYSL DDRSEYGTGL SGALEKALTG RGIRVIHDGI NPTKDYTSQA TKILAENPDA
VYYSGYYAEL ALLTRALRSK GYTGKVVSGD GANDDQLIHQ AGAGNAEGTL LTCPCGDPNS
DPAAAGFVAD YKTINADARP GTYSGEAYDA TNAVIEVLRR LGSGATREAV LARFGSVDIP
GVTKRIRFRK NGEVEGSTVY VYEVRAGKRA VLGPVSSLVR P
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