Gene Francci3_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1612 
Symbol 
ID3903747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1933152 
End bp1933754 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content65% 
IMG OID637878949 
ProductNLP/P60 
Protein accessionYP_480717 
Protein GI86740317 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.676409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGATAG GTCTCGGTCG CCGCCAGCAG GGTCGGGTCG AAGTCGACAG TGGCATGGGT 
GAGGGCGAGG TAGCTGCCGG ACAGCAGGGC GTCGACGAGC CGTCCCCGAT GCCGTACGGG
TCGTCGGCAT CGGGGACGAA GGGAAGGACC GCGATCCTGA ATCATCGCGT CTCCTCTCAA
GCCTGCTGGA TCCGAAGGTC CCTGCCGCGC AACACCATGA TCATAGCTCC TTGCTGGCTC
GACGACGCCG GGGAGGAGAC CACGGCGAGC CGTGCTGTCG CAGTTTCTCT GGGGCTGGAT
CGGGTCGACA TCGTCAACAA GGGTCCGGCG GTGCGGTGGT CGGTGTACGG CGTCCGAGCC
GTGCGGCATG TGCAACTCGG GTGCGGACCA GGGGCCGGCC AGCAGCAGTT CCAGGCCACG
GTGCGCATCC CCAGGTCCGG GAAGAAGCCC GGCGACCTCA TCTTCTTCGG GACTCCCGGC
AACATCACCC ACCTGGGCAT CTACGCAGGC AACGGCTATA TGTGGGCCGC GCCACAAACT
CGACGAAATG TCAACCTACA GCCCATCTAC AGCAGCAGCT ACTACGTCGG CAGGGTCCGG
TAA
 
Protein sequence
MPIGLGRRQQ GRVEVDSGMG EGEVAAGQQG VDEPSPMPYG SSASGTKGRT AILNHRVSSQ 
ACWIRRSLPR NTMIIAPCWL DDAGEETTAS RAVAVSLGLD RVDIVNKGPA VRWSVYGVRA
VRHVQLGCGP GAGQQQFQAT VRIPRSGKKP GDLIFFGTPG NITHLGIYAG NGYMWAAPQT
RRNVNLQPIY SSSYYVGRVR