Gene Francci3_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1500 
Symbol 
ID3904966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1794278 
End bp1795390 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content73% 
IMG OID637878837 
Productamidinotransferase 
Protein accessionYP_480605 
Protein GI86740205 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2235] Arginine deiminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGGT CGACGGTTCT CATCCAGAAT CCGACGGTGG TGCAGCCGGC CGAGACGTCG 
GTGTTCCTGG CACCCCGTCC GTCCTACGAC CCGGTCCGGG CCGCGGCCGA GTCCGCCGCG
GTGCGAGCGG CGCTCGCCGA CCTCGGGGCC CGTCCCTGTG CCCCGTCCGA GATCCTCGCG
GCGCTGCCCC GGGAGGTCCT GATCGAGCTC GCCGTCCGCG CGGTCAGCGC TGAGGACGAC
CTGCGAATGG CCGCCGCCCG CGAGGCGCTC CACGACTGGT CGGCGCCGGC GCTGGTGCCG
GTGGTGCTGC GCCAGCCGCG GCTGCTGCTC GACCCCGGCG CCGCCCGCGG CGTGATCGGC
CCCGACCAGG CGGACGAGAG CTACGCTCTG CGTCCCCTGG CCGGGTTGAT GTTTCCTCGT
GATCATTATG TCGATCTCGG TGAAGCGGTC GCGGTCGGCC GGTTGCGGCG CCGGGACCGG
GCCCGCGAGA CGGTCGTCAT GGCGGCCGTG CTGCGCGGGT TGCGGGGCCG ATCGGCCGAG
GTCCGCGTCC CGGAGCCGCT GTTCCTGGAA GGCGGGGATC TGGTGAGCTG CGGCGATGTG
GCCGTCCTCG GCACCGGTTG GCGGACCAGC CCGGCGGTCT GGGGGCTGTT GCGTCCGCAT
CTGCTGGCCA GCTTCGGTCA CGTGGTGCGG GTCCGCGACG AGCTGCGGCG TGACGGCCAG
CCCCATCTGA ACTCCTGGCT CGGCCTCGGC CCGGGGATCG CCCTCGTCGC CGCCGATCGG
CTGCACGCCC CGGCGGTGGT GGAACGCGAC GGCGTCGCCG GCCGGGAGAC GACGCTGGTC
GACGCCCTGC GAACGATCAA TCTCGCCGTC TGTCCGCTGG CACCGGACAT GGTCGCGGCC
TTCGCCGCGG GGGTGTTCTT CCTACCGGCC TTCGCGCCGC CGGAATCGGT CCTCCGGTCG
GAGCCGGCCG CCCTGGTATC CACGGCGAGT GCGCCCTGGA CCGAACCGGT GCTGTCGCGG
TTCGGGATCC AGACCGTCGC GGTGCCGTTT GACGAACATC ACAAGCAGTT CGGCAGCCTG
CACCGGGCGC TCAACACCGT CCCGCTGCGC TGA
 
Protein sequence
MTGSTVLIQN PTVVQPAETS VFLAPRPSYD PVRAAAESAA VRAALADLGA RPCAPSEILA 
ALPREVLIEL AVRAVSAEDD LRMAAAREAL HDWSAPALVP VVLRQPRLLL DPGAARGVIG
PDQADESYAL RPLAGLMFPR DHYVDLGEAV AVGRLRRRDR ARETVVMAAV LRGLRGRSAE
VRVPEPLFLE GGDLVSCGDV AVLGTGWRTS PAVWGLLRPH LLASFGHVVR VRDELRRDGQ
PHLNSWLGLG PGIALVAADR LHAPAVVERD GVAGRETTLV DALRTINLAV CPLAPDMVAA
FAAGVFFLPA FAPPESVLRS EPAALVSTAS APWTEPVLSR FGIQTVAVPF DEHHKQFGSL
HRALNTVPLR