Gene Francci3_1492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1492 
Symbol 
ID3903129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1786842 
End bp1787672 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content72% 
IMG OID637878829 
Productmethenyltetrahydrofolate cyclohydrolase 
Protein accessionYP_480597 
Protein GI86740197 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.310861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATGC TCGACGGGCG GTCGATGGCC GCCGAGATCG GCAGGTACGT GGTCGACGAG 
GCCGAGAGGC TGGCTGCGGC GGGAGTCACG CCGACCCTGG CTGTGGTCCT GCCGACCGCG
GATCCGGCCG CGTATTCCTA TGCCGAGATC ATCGAACGGA CCGCGGGCAA GGTCGGCGTG
CACTGTGTGC TGCATGAGCC GAAGGGCGAG CCGGCGGCGA TCCTCGACAC GATCGACACC
GTCGCCGCCG ATCCGACCGT GCACGGGATC ATCGTCCAGA CGCCGCTGCC AGGCGGGCTG
ACCTCCCGCG AGGTCGGCGA GCACATTCCG ACGGCCAAGG ACGTCGACGG GATGAACCCG
AGCAGTCTCG GCCGGCTCGC GCTGGGTCTG CCGAGCTTCG CGCCGGCCAC CGCCGCCGCG
GTGGTGGAGA TCCTCACCCG GGCCCGCATC CCGATGTCCG GCGCCCGGGT ATGCGTGATC
GGCCGCGGCC CAGTGGTCGG CAAGCCGGTC TCGCTGCTGT TGCTCGCCGA GGACGCGACC
GTGACGATCT GCCACTCCCG GACCAAGGGA CTGGTGAGCA TCGCCCACGA GGCCGACATC
ATCGTGTCCG CCACCGGCCA TCCCCGCCTC GTCGGCGCCG GCTTCGTCCG CCCGGGTGCG
GCCGTCATCG ACGTCGGCAC CGTCGTGACC GAGACCGGGC AGGTCGGTGA CGTGGACGCC
GCGGCCGTCT CGTCCGTGGC GGGCGCCCTC ACCCCGGTGC CGGGCGGCGT GGGACCGGTC
ACCACGATGC TCCTGCTGCG CAACACGATC CGGGCGGCGC GCGCCGCCTG A
 
Protein sequence
MRMLDGRSMA AEIGRYVVDE AERLAAAGVT PTLAVVLPTA DPAAYSYAEI IERTAGKVGV 
HCVLHEPKGE PAAILDTIDT VAADPTVHGI IVQTPLPGGL TSREVGEHIP TAKDVDGMNP
SSLGRLALGL PSFAPATAAA VVEILTRARI PMSGARVCVI GRGPVVGKPV SLLLLAEDAT
VTICHSRTKG LVSIAHEADI IVSATGHPRL VGAGFVRPGA AVIDVGTVVT ETGQVGDVDA
AAVSSVAGAL TPVPGGVGPV TTMLLLRNTI RAARAA