| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1474 |
|---|
| Symbol | |
|---|
| ID | 3903111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 1765562 |
|---|
| End bp | 1766131 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637878812 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_480580 |
|---|
| Protein GI | 86740180 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.520194 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.231474 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGACG CGGCTGACAC GGCTGACACG GCGGGCCGCA CGGAGACGGC GGGTCCGGCA
GGTACGGCAG GTACGGCAGG TACGGCGGCG AAACAGCGAC CGCTCGCCGT CATCGACGTC
GACGGGGTGG TGGCCGACGT CCGACACCGA TTGCGCTTCC TGCGCGCCAG TCCCAGCGAC
TGGGAGGCGT TCTTCGCGGC GGCGCCCGCC GATCCCCCCC TGGCCGAAGG GGTGGAACTG
GCCCGCAAGC TGGCCCGAGA CCACGAGGTG GTATGGCTGA CCGGCCGGCC GGAGCGTTCC
AGAGAGGCGA CGCGGCGCTG GCTGACCGAG CAGGATCTGC CGCCGGGTGA GCTGCGGATG
CGTCCGGACG CCGACCGTCG GCCGGCTCGG GTGTTCAAAC GCGCCGAACT TCGCGAGCTC
GGCGCCGGCC GTCGGGTCGC CGTCGTGGTC GACGACGACC CCGCCGTGGT GGACCTGCTG
CGCGCCGACG GCTGGCCGGT CCTGCGGGCC GAATGGCTCG CCTACGAGGC GACGCTGGGC
AACGCCCAGG AGACCGAGGG CCGCACCTGA
|
|---|
| Protein sequence | MTDAADTADT AGRTETAGPA GTAGTAGTAA KQRPLAVIDV DGVVADVRHR LRFLRASPSD
WEAFFAAAPA DPPLAEGVEL ARKLARDHEV VWLTGRPERS REATRRWLTE QDLPPGELRM
RPDADRRPAR VFKRAELREL GAGRRVAVVV DDDPAVVDLL RADGWPVLRA EWLAYEATLG
NAQETEGRT
|
|---|
| |