Gene Francci3_1468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1468 
Symbol 
ID3903105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1760419 
End bp1760964 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content68% 
IMG OID637878806 
ProductFHA domain-containing protein 
Protein accessionYP_480574 
Protein GI86740174 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0818364 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCTGCA CGAGGTGCGG ACAGCAGAAC CCGTCCGACG CGCTGTATTG CGCGCGGTGC 
GGGTCTCCTC TGGTACGTCC GGGTGAGCCC GTGGCGCCGG AGAGACCCGC GGAGCAGACG
TCGACGCTGA ACCTGGCGGC CGCGCTGTCC GGCATCGAGG GCGATCACGT CGACGAGTCG
ACCGAGCGGG ACGCCGTGGC CGCCGTTGAC GCGCTACCTC CCGGCTCGGC GTTGCTCGTC
GTCAAGAGGG GGCCGAATGC GGGGAGTCGT TTTCTGCTGG ACGCCGACAT GACGACCGTC
GGCCGCCATC CCGAGAGCGA TATCTTCCTC GACGATGTGA CCGTCTCCCG TCGGCATGCG
GAGTTCCATC GCTCGCCGTA CACCAAGGGC TTCTCGGTTC GCGACGTCGG GAGCCTGAAC
GGTACCTACC TCAACCGCGA GCGGATCGAC TCGGCTGAGC TCACCAGCGG CGACGAGGTG
CAGATCGGCA AGTTCCGACT GGTGTTCCTG ACTGGCGCGA GCTACGGGGG GTCAGCGGCA
CGGTGA
 
Protein sequence
MFCTRCGQQN PSDALYCARC GSPLVRPGEP VAPERPAEQT STLNLAAALS GIEGDHVDES 
TERDAVAAVD ALPPGSALLV VKRGPNAGSR FLLDADMTTV GRHPESDIFL DDVTVSRRHA
EFHRSPYTKG FSVRDVGSLN GTYLNRERID SAELTSGDEV QIGKFRLVFL TGASYGGSAA
R