Gene Francci3_1427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1427 
Symbol 
ID3903158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1720049 
End bp1721131 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content77% 
IMG OID637878764 
Producthypothetical protein 
Protein accessionYP_480533 
Protein GI86740133 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.784206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0381743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAGC CGGCGACGCT CGGGGAGGCG ACCTCGGCGC CGGTGCCCGC TCCCGCGGCA 
CCCGGGGGAG CGGTGCCGGC CCCGGCCCCC GCCTGCCGGG GGTGGTCCAC CGTGCGCCCA
CCGGTCCACG GGTTGGGGGC GCTGCTCGAT CGGGTCGACG CCCGCACGCT GCCGGCGACC
TCTCGCGCGA TCGCGATCGT CCGGGTGTGG ATGGTGGGCC TGGCGGAGCG GGAGATCGGT
CGGGTCCGCC GAACCCGGGA CCGGGTCCGG CGGACCCGGG ACCGGGTCCG GCCCTCGCCT
GCCGGCTCCG ACGACGATGA CGGTCCGCCG GCCCTGCTCG ACGTGGCCGG AGTCACGCCC
GGCGGGGTGG TGGACTGGGG CGTCCGGATG CTCGTCCTCG GACTCGTCGC GTTGATCGTG
GTGAGCGCGA CGGCCGCGAT CCTGCAGGGC GTCGATCATG CTCCGTCGTC CGGACCGTCC
TCCTCGGCGA CCGAGCAGGC AGCGACGTCC GCGAACCAGC CGGCGGCGCC CGACCAGCCG
GTGGCGCCCG CGCTGCCCGC GGTGACGATC GGCCCCGGGC CGAACGACCC GGTCGCCGAC
TACCTCGGCG CCAGCCGGCA GAACCTCGCG TTGCTGACCT CGGCCGCCCC CGGCGCCGAT
CTCTACGCCG TGGCCAGTCT CACCGCGCCC CGCACCCCCG CCGACCTGCT CGAGGTGTTC
GGCGACTTCC GGACCGTCCA GGTGTTCTTC ACCGCCGGTA TCGGGGGTGA ACAGGAGCAG
GCCGTCGTGC GCGATCCGGT GGCCGACGTC CGGGCGGCCT TCGGGTCGGC GGCGGCCCAG
GCGGACGCCC GAGCCGCCGC CGACACACAG GTCGGCAACA CCGCCGCCGC CGACCGCGAG
CGGCGGGCGG CGAACGACCT GCGGGCCGGG TGCGGGTGTC TGTTCGCCGT GGTGGTCCGC
GCCCCGGCCG GCCGGCTCTC GCAGCTCGAA ACCGATCCCC GGGTGCGGGT GGTGGATCCG
GCCCCACCGG GAAGCGGGCC GCCGGGTGTG AGATTCATCC CACTGTCCCC GGACCGTCGC
TGA
 
Protein sequence
MTEPATLGEA TSAPVPAPAA PGGAVPAPAP ACRGWSTVRP PVHGLGALLD RVDARTLPAT 
SRAIAIVRVW MVGLAEREIG RVRRTRDRVR RTRDRVRPSP AGSDDDDGPP ALLDVAGVTP
GGVVDWGVRM LVLGLVALIV VSATAAILQG VDHAPSSGPS SSATEQAATS ANQPAAPDQP
VAPALPAVTI GPGPNDPVAD YLGASRQNLA LLTSAAPGAD LYAVASLTAP RTPADLLEVF
GDFRTVQVFF TAGIGGEQEQ AVVRDPVADV RAAFGSAAAQ ADARAAADTQ VGNTAAADRE
RRAANDLRAG CGCLFAVVVR APAGRLSQLE TDPRVRVVDP APPGSGPPGV RFIPLSPDRR