Gene Francci3_1321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1321 
Symbol 
ID3906593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1583921 
End bp1584631 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content72% 
IMG OID637878654 
Producthypothetical protein 
Protein accessionYP_480427 
Protein GI86740027 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.457937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGTA CGCCATCTCC CGACACGCCG CCGATGACGA TGTCCGAGGC CATCGGCGGC 
CCACGGGGGA TCATCGACAG CTCCGTGCCC ACCGTGGCGT TCGTGACGGT GAACGCCGAG
GCCGGACTGA CCGCCGGCAT CGCGGTCGCC ATTGCCACGG CGGCCGCTCT GCTGGCGCTG
CGCATCGTGC GCCGTGAGCC GACCCAGCAG ACCTTCTCGG GGTTGTTCGC CGTGGCGGTC
GCCGCATTCG TGGCCTCTCG TACCGGGAAT GCGAAGGGGT TCTTCCTGCC CAGCATCGCG
AAGAACGCGC TCTGGGGGGT GGTGGCCCTG CTGTCGATCG TCCTGCGCCG GCCGGTGGCG
GGGTATCTCA TGGCCGGTCT GGACAGCCGC TATGCGAGCT GGCAGCGGGT ACCCTGCCAG
CGGCGGGCCG CGGTGTGGGC GACGGTGGTC TGGATCGCTG TGTTCGGTGT GCGGTTCGTC
GTGCAGGGGG TGCTCTACCT CGCCGACCAG CCCGGCTGGC TGGCCGCGGC CAACATCGCC
CTGGGACTTC CGCTGTTCGG TGTCGCGGTG TTGGCCAGCT TCGCCATCGT CCGCCGGATC
GCACCGCTGC CCCCCGCCGC CACCGACTCG ACGGTCGTGG CCGGCGAGGT GCTGGCCGAG
GACGCCCCGC GCGGCGAGCC CCCGCGCGGC GAGCGGCGGC CTGCCGGCTG A
 
Protein sequence
MPRTPSPDTP PMTMSEAIGG PRGIIDSSVP TVAFVTVNAE AGLTAGIAVA IATAAALLAL 
RIVRREPTQQ TFSGLFAVAV AAFVASRTGN AKGFFLPSIA KNALWGVVAL LSIVLRRPVA
GYLMAGLDSR YASWQRVPCQ RRAAVWATVV WIAVFGVRFV VQGVLYLADQ PGWLAAANIA
LGLPLFGVAV LASFAIVRRI APLPPAATDS TVVAGEVLAE DAPRGEPPRG ERRPAG