Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1316 |
Symbol | |
ID | 3906588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 1580641 |
End bp | 1581204 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637878649 |
Product | hypothetical protein |
Protein accession | YP_480422 |
Protein GI | 86740022 |
COG category | [R] General function prediction only |
COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.287279 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.646267 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCCGTC CGGATCGGCG GCGTCGCGAT CAGCGGGAGG CTCGGATGGC CGTGTACGCC CTGGGGGACG CCGTCCCCAC CATCGATCCC ACGGCCTACG TCCATCCGGA CGCGACGGTC ATCGGCACGG TGACGATCGG GCCCGAGTCC ACGGTGTGGC CGGGCGCGGT GCTGCGTGGC GACTACGGGA CGATCGAGAT CGGTGCCCGC ACGTCCATCC AGGACGGCAC GGTGATCCAC GCCACCGAGG AGCTCACCAC GGTAGTGGGC GACGACTGCA CCGTCGGGCA TCTGGCTCAC CTGGAGGGTT GTGTCGTCGA GGACGGCGCC CTGGTCGGTT CCGGTTCGGT GGTACTCCAC CGGGTCCGGA TCGGCCGGGG CGCGCTGGTC GGCGCGGGCG CGGTCGTCGT GGGCGGCACG GTCGTGCCGC CGGGCGCGAG GGCGCTCGGC GTGCCGGCGA AGATCCTGCC GGACTCCGTC GCCCCGGGTG CCCTCGCCGC CGGGGCCGCG ATCTACGTGG CGAACGGCAA GCACTACCGC GAGCAGCTAC GCCGGATCGA CTGA
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Protein sequence | MRRPDRRRRD QREARMAVYA LGDAVPTIDP TAYVHPDATV IGTVTIGPES TVWPGAVLRG DYGTIEIGAR TSIQDGTVIH ATEELTTVVG DDCTVGHLAH LEGCVVEDGA LVGSGSVVLH RVRIGRGALV GAGAVVVGGT VVPPGARALG VPAKILPDSV APGALAAGAA IYVANGKHYR EQLRRID
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