Gene Francci3_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1316 
Symbol 
ID3906588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1580641 
End bp1581204 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content73% 
IMG OID637878649 
Producthypothetical protein 
Protein accessionYP_480422 
Protein GI86740022 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.287279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.646267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCGTC CGGATCGGCG GCGTCGCGAT CAGCGGGAGG CTCGGATGGC CGTGTACGCC 
CTGGGGGACG CCGTCCCCAC CATCGATCCC ACGGCCTACG TCCATCCGGA CGCGACGGTC
ATCGGCACGG TGACGATCGG GCCCGAGTCC ACGGTGTGGC CGGGCGCGGT GCTGCGTGGC
GACTACGGGA CGATCGAGAT CGGTGCCCGC ACGTCCATCC AGGACGGCAC GGTGATCCAC
GCCACCGAGG AGCTCACCAC GGTAGTGGGC GACGACTGCA CCGTCGGGCA TCTGGCTCAC
CTGGAGGGTT GTGTCGTCGA GGACGGCGCC CTGGTCGGTT CCGGTTCGGT GGTACTCCAC
CGGGTCCGGA TCGGCCGGGG CGCGCTGGTC GGCGCGGGCG CGGTCGTCGT GGGCGGCACG
GTCGTGCCGC CGGGCGCGAG GGCGCTCGGC GTGCCGGCGA AGATCCTGCC GGACTCCGTC
GCCCCGGGTG CCCTCGCCGC CGGGGCCGCG ATCTACGTGG CGAACGGCAA GCACTACCGC
GAGCAGCTAC GCCGGATCGA CTGA
 
Protein sequence
MRRPDRRRRD QREARMAVYA LGDAVPTIDP TAYVHPDATV IGTVTIGPES TVWPGAVLRG 
DYGTIEIGAR TSIQDGTVIH ATEELTTVVG DDCTVGHLAH LEGCVVEDGA LVGSGSVVLH
RVRIGRGALV GAGAVVVGGT VVPPGARALG VPAKILPDSV APGALAAGAA IYVANGKHYR
EQLRRID