Gene Francci3_1302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1302 
Symbol 
ID3904351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1557261 
End bp1558265 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content70% 
IMG OID637878635 
Producthypothetical protein 
Protein accessionYP_480408 
Protein GI86740008 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCCGA TGTCCAGCAC CCACCCGATC CTGGTCGACT GTGCCGGTGC CCGGATGGGC 
GGGGCATTGC GGTTCCTGAC CGAACTGGAC GGTTACCTGA GTTTTCGGCC GGGCCTGCAG
GTCCATCTGG TCGGCCGAGA TCGCCGGATC GGACCGGGCT GGCTCGCCCG CCGGGAGCGG
CCTGGGCGGT ACGCGCGCGC GATCGCCCTC AACAACGTCG GCTTCCTCGC GACCCGCGGC
GAACGGTGGG TCCTGCTGCG CAACGTGCTG CACTTCCTGC CGGCGGAGGA GGCCCGGCGG
CTACCCGGCG GCCTGCCCGA CGGCGTGGCA CGGACAGCAC GTCTCGTGCG GCTGTTCGCC
CGTCGTGCGG ACGTGGTCGT CGTACCGACG ACCACGATGG CGGACCGGGT TCTCACCATA
CTTCCTAGCC TGTCCGCCAG GCTGGTGGTC CGGCCCCATC CGCTGTCCCC CGATCCGACC
CCTCCCCAGG CCCGTACGCC GGGCCGGTTT CTGTGTCCCG TGTTGTTCGC GCCGTTCAAA
CCGATGGGGC ACTTGCTCCG CATGGTCGAT GCCGCCGCGA CCCGGCTTCA GGAGGAGATC
GGAGCCCACC TCGCGATCAC GGTCACCGCG ACCGATCGCG AGGCCCACGA ACACGGCCTG
TCCCACTGTC GGACGCTGCG GTTCGTGGGC CGGCTGACGC CGGCCGAGCT GCGGGCCCAC
CAACGCGATG CCGGCGCGTT GCTGCAGCCG ACGACGATGG AGTCCTTCGG CTACCCGCTC
GCCGAGGCAC GGCTCGCCGG GATACCCGTC ATCGCCCGCG ACACCTCACA CAACCGCGAG
GTGGCCGGCC CGGTTCTGGT GCCGTACTCC CGGGAGTCGG CGGATGATCT CGCCGTGGCG
CTGCGCACGG CGCTCACGTT CACACCACGG CCCGAGACGG GAAACCCCTT CGATCCGACG
CGTTACTTCG ACTGGTTGCT CGACGCAGGA GAGAGCTCAC CGTGA
 
Protein sequence
MRPMSSTHPI LVDCAGARMG GALRFLTELD GYLSFRPGLQ VHLVGRDRRI GPGWLARRER 
PGRYARAIAL NNVGFLATRG ERWVLLRNVL HFLPAEEARR LPGGLPDGVA RTARLVRLFA
RRADVVVVPT TTMADRVLTI LPSLSARLVV RPHPLSPDPT PPQARTPGRF LCPVLFAPFK
PMGHLLRMVD AAATRLQEEI GAHLAITVTA TDREAHEHGL SHCRTLRFVG RLTPAELRAH
QRDAGALLQP TTMESFGYPL AEARLAGIPV IARDTSHNRE VAGPVLVPYS RESADDLAVA
LRTALTFTPR PETGNPFDPT RYFDWLLDAG ESSP