Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1302 |
Symbol | |
ID | 3904351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 1557261 |
End bp | 1558265 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637878635 |
Product | hypothetical protein |
Protein accession | YP_480408 |
Protein GI | 86740008 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGGCCGA TGTCCAGCAC CCACCCGATC CTGGTCGACT GTGCCGGTGC CCGGATGGGC GGGGCATTGC GGTTCCTGAC CGAACTGGAC GGTTACCTGA GTTTTCGGCC GGGCCTGCAG GTCCATCTGG TCGGCCGAGA TCGCCGGATC GGACCGGGCT GGCTCGCCCG CCGGGAGCGG CCTGGGCGGT ACGCGCGCGC GATCGCCCTC AACAACGTCG GCTTCCTCGC GACCCGCGGC GAACGGTGGG TCCTGCTGCG CAACGTGCTG CACTTCCTGC CGGCGGAGGA GGCCCGGCGG CTACCCGGCG GCCTGCCCGA CGGCGTGGCA CGGACAGCAC GTCTCGTGCG GCTGTTCGCC CGTCGTGCGG ACGTGGTCGT CGTACCGACG ACCACGATGG CGGACCGGGT TCTCACCATA CTTCCTAGCC TGTCCGCCAG GCTGGTGGTC CGGCCCCATC CGCTGTCCCC CGATCCGACC CCTCCCCAGG CCCGTACGCC GGGCCGGTTT CTGTGTCCCG TGTTGTTCGC GCCGTTCAAA CCGATGGGGC ACTTGCTCCG CATGGTCGAT GCCGCCGCGA CCCGGCTTCA GGAGGAGATC GGAGCCCACC TCGCGATCAC GGTCACCGCG ACCGATCGCG AGGCCCACGA ACACGGCCTG TCCCACTGTC GGACGCTGCG GTTCGTGGGC CGGCTGACGC CGGCCGAGCT GCGGGCCCAC CAACGCGATG CCGGCGCGTT GCTGCAGCCG ACGACGATGG AGTCCTTCGG CTACCCGCTC GCCGAGGCAC GGCTCGCCGG GATACCCGTC ATCGCCCGCG ACACCTCACA CAACCGCGAG GTGGCCGGCC CGGTTCTGGT GCCGTACTCC CGGGAGTCGG CGGATGATCT CGCCGTGGCG CTGCGCACGG CGCTCACGTT CACACCACGG CCCGAGACGG GAAACCCCTT CGATCCGACG CGTTACTTCG ACTGGTTGCT CGACGCAGGA GAGAGCTCAC CGTGA
|
Protein sequence | MRPMSSTHPI LVDCAGARMG GALRFLTELD GYLSFRPGLQ VHLVGRDRRI GPGWLARRER PGRYARAIAL NNVGFLATRG ERWVLLRNVL HFLPAEEARR LPGGLPDGVA RTARLVRLFA RRADVVVVPT TTMADRVLTI LPSLSARLVV RPHPLSPDPT PPQARTPGRF LCPVLFAPFK PMGHLLRMVD AAATRLQEEI GAHLAITVTA TDREAHEHGL SHCRTLRFVG RLTPAELRAH QRDAGALLQP TTMESFGYPL AEARLAGIPV IARDTSHNRE VAGPVLVPYS RESADDLAVA LRTALTFTPR PETGNPFDPT RYFDWLLDAG ESSP
|
| |