Gene Francci3_1267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1267 
Symbol 
ID3906113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1513479 
End bp1514516 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content67% 
IMG OID637878601 
ProductPhoH-like protein 
Protein accessionYP_480374 
Protein GI86739974 
COG category[T] Signal transduction mechanisms 
COG ID[COG1702] Phosphate starvation-inducible protein PhoH, predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0973906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAAT CCGTTACGCC ACCCGTCGCG CCCGACACCA GGGTCCAGAC GCGCATTGTC 
GTACCCGGTC CGCACAGCAT GGTGAGTCTG CTCGGTCACC AGGATCAGCT GCTCCGTACC
ATCGAGAAGG CTTTCTCCTC GGATATCCAC GTGCGTGGCA ACGAGATCAC CATTACCGGC
GCTCCGGCTG AGAACGAGCT CGCCGCCAGG TTGTTCGCTG AGCTCATCGC GCTGCTCGAC
GCCGGGACGG AGCTCAGCCC GCAGCATGTC GACCATTCGC TGGCGATGCT GCGCAGCGGC
GCCGAGGAGC GGCCGGCCGA GGTTCTCACC CTCAACATCC TCTCCAGCCG GGGCCGGACG
ATACGGCCGA AGACGCTGAA CCAGAAGCGG TACGTCGACG CGATCGACCA GCACACCATC
GTTTTCGGGA TCGGGCCGGC CGGCACCGGC AAGACCTACC TCGCCATGGC GAAGGCCGTT
CAGGCGTTGC AGGCCAAGAA GGTGAACCGG ATCATTCTGA CCCGCCCCGC GGTCGAGGCG
GGGGAACGCC TCGGGTTCCT GCCGGGGACC CTGTACGAGA AGATCGATCC CTACCTGCGG
CCGCTCTACG ACGCGCTGCA TGACATGATC GATCCGGACT CGATCCCGCG GCTGATGCAG
AGCGGCACGA TCGAGGTGGC CCCACTGGCC TACATGCGCG GCCGGACGCT GAACGACGCC
TTCATCATCC TCGACGAGGC CCAGAACACC TCGCCGGAAC AGATGAAGAT GTTCCTTACC
CGGCTCGGCT TCGGCGCGAA GATCGTCGTT ACCGGGGACG TGACCCAGGT CGACCTCCCC
AGCGGCACCC GCAGCGGGCT GCGGGTGGTC CGGGAGATCC TCGACGGCCT CGGCGACGTC
CATTTTGCAT CCCTGACCAG CTCCGATGTG GTTCGGCACC GGCTCGTGAG CGAGATCGTC
GACGCCTACG CCCGCTGGGA CGCGGCCAGT GCGCCGCCAC CCGCTCCGGC CCGGTCTGCT
CGTCGGGACC GACGGTGA
 
Protein sequence
MPESVTPPVA PDTRVQTRIV VPGPHSMVSL LGHQDQLLRT IEKAFSSDIH VRGNEITITG 
APAENELAAR LFAELIALLD AGTELSPQHV DHSLAMLRSG AEERPAEVLT LNILSSRGRT
IRPKTLNQKR YVDAIDQHTI VFGIGPAGTG KTYLAMAKAV QALQAKKVNR IILTRPAVEA
GERLGFLPGT LYEKIDPYLR PLYDALHDMI DPDSIPRLMQ SGTIEVAPLA YMRGRTLNDA
FIILDEAQNT SPEQMKMFLT RLGFGAKIVV TGDVTQVDLP SGTRSGLRVV REILDGLGDV
HFASLTSSDV VRHRLVSEIV DAYARWDAAS APPPAPARSA RRDRR