Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1267 |
Symbol | |
ID | 3906113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1513479 |
End bp | 1514516 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637878601 |
Product | PhoH-like protein |
Protein accession | YP_480374 |
Protein GI | 86739974 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1702] Phosphate starvation-inducible protein PhoH, predicted ATPase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0973906 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGAAT CCGTTACGCC ACCCGTCGCG CCCGACACCA GGGTCCAGAC GCGCATTGTC GTACCCGGTC CGCACAGCAT GGTGAGTCTG CTCGGTCACC AGGATCAGCT GCTCCGTACC ATCGAGAAGG CTTTCTCCTC GGATATCCAC GTGCGTGGCA ACGAGATCAC CATTACCGGC GCTCCGGCTG AGAACGAGCT CGCCGCCAGG TTGTTCGCTG AGCTCATCGC GCTGCTCGAC GCCGGGACGG AGCTCAGCCC GCAGCATGTC GACCATTCGC TGGCGATGCT GCGCAGCGGC GCCGAGGAGC GGCCGGCCGA GGTTCTCACC CTCAACATCC TCTCCAGCCG GGGCCGGACG ATACGGCCGA AGACGCTGAA CCAGAAGCGG TACGTCGACG CGATCGACCA GCACACCATC GTTTTCGGGA TCGGGCCGGC CGGCACCGGC AAGACCTACC TCGCCATGGC GAAGGCCGTT CAGGCGTTGC AGGCCAAGAA GGTGAACCGG ATCATTCTGA CCCGCCCCGC GGTCGAGGCG GGGGAACGCC TCGGGTTCCT GCCGGGGACC CTGTACGAGA AGATCGATCC CTACCTGCGG CCGCTCTACG ACGCGCTGCA TGACATGATC GATCCGGACT CGATCCCGCG GCTGATGCAG AGCGGCACGA TCGAGGTGGC CCCACTGGCC TACATGCGCG GCCGGACGCT GAACGACGCC TTCATCATCC TCGACGAGGC CCAGAACACC TCGCCGGAAC AGATGAAGAT GTTCCTTACC CGGCTCGGCT TCGGCGCGAA GATCGTCGTT ACCGGGGACG TGACCCAGGT CGACCTCCCC AGCGGCACCC GCAGCGGGCT GCGGGTGGTC CGGGAGATCC TCGACGGCCT CGGCGACGTC CATTTTGCAT CCCTGACCAG CTCCGATGTG GTTCGGCACC GGCTCGTGAG CGAGATCGTC GACGCCTACG CCCGCTGGGA CGCGGCCAGT GCGCCGCCAC CCGCTCCGGC CCGGTCTGCT CGTCGGGACC GACGGTGA
|
Protein sequence | MPESVTPPVA PDTRVQTRIV VPGPHSMVSL LGHQDQLLRT IEKAFSSDIH VRGNEITITG APAENELAAR LFAELIALLD AGTELSPQHV DHSLAMLRSG AEERPAEVLT LNILSSRGRT IRPKTLNQKR YVDAIDQHTI VFGIGPAGTG KTYLAMAKAV QALQAKKVNR IILTRPAVEA GERLGFLPGT LYEKIDPYLR PLYDALHDMI DPDSIPRLMQ SGTIEVAPLA YMRGRTLNDA FIILDEAQNT SPEQMKMFLT RLGFGAKIVV TGDVTQVDLP SGTRSGLRVV REILDGLGDV HFASLTSSDV VRHRLVSEIV DAYARWDAAS APPPAPARSA RRDRR
|
| |