| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1228 |
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| Symbol | |
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| ID | 3902973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1470493 |
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| End bp | 1472118 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637878561 |
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| Product | malate synthase |
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| Protein accession | YP_480335 |
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| Protein GI | 86739935 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.112102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.512222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTCGT TGGACGGGGT GACGGTGCAC GGGGTGTCCG CGGTGCGGAC CGTGCCGGGG
CTCACCGCGG AGCAGGTCGA CGCGGTGCTC TCCGACAACG CGCTGGCCTT CGTCGCCGGG
TTGCACCGCA CGTTCGCCGG CCGGCGTGCC GAACTGCTCG CCGCCCGGGC CGCCCGCCGC
GCCGCGATCG CAGCCGGGGC CACCCTGGAT TTCCTGCCGC AGACCGCCGA CATCCGGGCC
GGGAACTGGC GGGTCGCGTC GCCGGCGCCG GGGCTGGTCG ACCGTCGGGC CGAGATCACC
GGCCCGACCG ACGCCAAGAT GCTCATCAAC GCGCTCAACA GCGGTGCCCG GGTCTTCATG
GCGGACCTCG AGGACGCCAA CGTGCCGACC TGGTCGAACA TGGTCGTCGG ACAGCACAAC
CTGAGTGAGG CCGTCGCCGG CACGCTCGCC TTCACCTCGC CCGACGGCCG TCGTTACGAG
CTCGACGAGT CCACGGCGAC GCTCGTGGTG CGCCCGCGCG GCTGGCACCT GCCGGAGCGG
CACGTCACCG TCGACGGGGA GCCGATCGTC GCCGCGCTCT TCGACGCCGG AATGTACCTG
GTCCGCAACG CGCACGCCCT GCGGGCTACG GGCGTGGCGC CGTACTTCTA CCTGCCGAAG
CTGGAGAGTC ATCTCGAGGC CCGGCTGTGG AACGACGTGT TCACCGCGGC GCAGGCCGAG
CTCGGCCTGC CCGTCGGCAC CATCCGGGCG ACCGTTCTCA TCGAGACGCT GCCCGCCGCC
TTCGAGATGG AGGAGATCCT CTACGAGCTG CGGGAGCATT CCGCCGGACT CAACGCTGGC
CGCTGGGACT ACATGTTCTC CACCATCAAG ACGTTCGCGT CCCGGCCGAC TGAGTTCCTG
CTGCCCGACC GCAACGGCGT GACGATGACG GTGCCGTTTC TGCGCGCCTA CACCGAGCTG
CTGGTCTCCA CCTGTCATCG CCGCGGCGCG CACGCGATCG GCGGGATGGC GGCGTTCATC
CCGTCGCGGC GCGACCCCGA GATCAACGCC GCGGCCCTGG CGAAGGTGCG CGCCGACAAG
GAGCGGGAGT CCGCGGACGG GTTCGACGGG AGCTGGGTGG CGCACCCTGA CCTGGTGCCG
GTGTGCACCG AGGTCTTCGA TGCGGTGCTC GGCGACGAGC CGAACCAGCT CACCCGGTTG
CGTGACGACG TCAAGGTCGG CGCCGGCGAC CTGCTGGCGG TGCGCGACAC TCCGGGTTCC
GTCACCGCGG CCGGGGTCCG CGGGAACATC AGCGTCGGGG TGCGCTACCT GGAGAGCTGG
CTGCGCGGGA TCGGGGCGGT CGGCATCGAC AACCTGATGG AGGACGCCGC CACCGCTGAG
ATCTCCCGTA GTCAGATTTT CCAGTGGATA GCCGCCGGGG TCGTGCTCGA CGACGGCCGT
CCGGTCACGG CCGATCTGGT CCGGACCGCT CTGGCGGAGG TGCTGGACCA GATCCGGCTC
TCCATCGGCG CCGCCGCCTT CGACAACGGT CGCTGGAAGG ACGCGGCGGC GGTGTTCGAG
GAGACGGCGC TCGGCGAGAC CTTCGTCGAG TTCCTTACTC TTCCCGCCTA CGAGCGGATC
GACTGA
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| Protein sequence | MGSLDGVTVH GVSAVRTVPG LTAEQVDAVL SDNALAFVAG LHRTFAGRRA ELLAARAARR
AAIAAGATLD FLPQTADIRA GNWRVASPAP GLVDRRAEIT GPTDAKMLIN ALNSGARVFM
ADLEDANVPT WSNMVVGQHN LSEAVAGTLA FTSPDGRRYE LDESTATLVV RPRGWHLPER
HVTVDGEPIV AALFDAGMYL VRNAHALRAT GVAPYFYLPK LESHLEARLW NDVFTAAQAE
LGLPVGTIRA TVLIETLPAA FEMEEILYEL REHSAGLNAG RWDYMFSTIK TFASRPTEFL
LPDRNGVTMT VPFLRAYTEL LVSTCHRRGA HAIGGMAAFI PSRRDPEINA AALAKVRADK
ERESADGFDG SWVAHPDLVP VCTEVFDAVL GDEPNQLTRL RDDVKVGAGD LLAVRDTPGS
VTAAGVRGNI SVGVRYLESW LRGIGAVGID NLMEDAATAE ISRSQIFQWI AAGVVLDDGR
PVTADLVRTA LAEVLDQIRL SIGAAAFDNG RWKDAAAVFE ETALGETFVE FLTLPAYERI
D
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