Gene Francci3_1213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1213 
Symbol 
ID3903567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1447860 
End bp1448402 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content70% 
IMG OID637878546 
Productrod shape-determining protein 
Protein accessionYP_480320 
Protein GI86739920 
COG category 
COG ID 
TIGRFAM ID[TIGR03426] rod shape-determining protein MreD 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGGCA TCGCCGGCCC TGAGGAGACC CTGCGCGGGC GCGCCGTCGT GGCCGCGGTC 
GTGCTCCTGA CCGTCGCCCT GATCCTCCAG GTCTCCGTGA TCGCCCGGCT GGGTCTGCCC
GGTGGCCGGC TTGACCTCAT GCTCGTTCTG TTGGCAGCGA TCGCGCTGAT CGAGGGGCCA
TTGCTCGGCG CGGTCGCCGG CTTCGTGGCG GGATTGCTGG CCGATCTGTC CTCCAGTCAT
GTCCTCGGTC AGACTGCTCT CGTTTTGTGT CTGATCGGTT ACGCTGTCGG ACTGGCGATG
GATGCGGCGG AGCGGTCGGT GGTGGTTCCC CTGGCGGCGA TCGGTGGGGC GAGTGTGCTG
GGCACTCTCG GATACGCCGC CACCACCTCG ATCCTCGGTG AGGCGGCGTT GACGGGAGGT
CAGGCTGTGC TGCGGGCGTT GGTAGCCGGC GTCTACGCCC TCCTGCTCAC CCCGTTCCTG
TTCCCGTTGC TGCTCGCGGG CTCCCGGCGG CTGGCCGGCG GTCGACGGCG GGAGCCGCGG
TGA
 
Protein sequence
MWGIAGPEET LRGRAVVAAV VLLTVALILQ VSVIARLGLP GGRLDLMLVL LAAIALIEGP 
LLGAVAGFVA GLLADLSSSH VLGQTALVLC LIGYAVGLAM DAAERSVVVP LAAIGGASVL
GTLGYAATTS ILGEAALTGG QAVLRALVAG VYALLLTPFL FPLLLAGSRR LAGGRRREPR