| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1206 |
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| Symbol | clpP |
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| ID | 3903560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1439356 |
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| End bp | 1440036 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637878539 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_480313 |
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| Protein GI | 86739913 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.102094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.674457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCCACG ACACGCTGTA CCAGCAGATG CGGCACGAGC AGGCCCGCCA GGCAGCCGCC
CAGCCGCAGG GCCGCTACGT CCTGCCGAAC ATCATCGAGA AGACCTCCCG CGGCGAGTAC
GGCATGGATC CGTATTCGAA GCTGCTCAAG GAGCGGATCG TCTTTCTCGG TGTGCAGATC
GATGATGTGT CGGCGAACGA CGTGATGGCG CAGCTGCTGT TCCTGGAGTC CGAGGATCCC
GACCGGGACA TCTCGATCTA CATCAACTCG CCGGGTGGGT CGTTCACGTC GTTGACGGCG
ATCTACGACA CGATGCAGTT CGTGCGGCCG GACATCTCGA CGATCTGCAT GGGTCAGGCG
GCGTCGGCGG CGGCGGTGCT GCTGGCGGCG GGCACGCCGG GGAAGCGGTT CGCGCTGGAG
AACAGCCGGA TCCTCATCCA CCAGCCGTCG GCGCAGGGCG AGGGCCAGTC GAGCGACATC
GAGATCCAGG CGCGGGAGAT CCTGCGGATG CGGTCTCTGC TGGAGCGGAT GCTCGCCGTC
CACACCGGCA AGAAGGAAGA GGACATCCGC AAGGACATCG AGCGTGACAA GATCTTCAGT
GCCGACGAGG CCAAGGAGTA CGGCCTGATC GACGAGGTCA TCAAGACCCG GAAGTCCTCC
CGGCTCGCCA CCGCTCGCTG A
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| Protein sequence | MFHDTLYQQM RHEQARQAAA QPQGRYVLPN IIEKTSRGEY GMDPYSKLLK ERIVFLGVQI
DDVSANDVMA QLLFLESEDP DRDISIYINS PGGSFTSLTA IYDTMQFVRP DISTICMGQA
ASAAAVLLAA GTPGKRFALE NSRILIHQPS AQGEGQSSDI EIQAREILRM RSLLERMLAV
HTGKKEEDIR KDIERDKIFS ADEAKEYGLI DEVIKTRKSS RLATAR
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